Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1392 ATGATGATGAACTCAGAACAAATGCAAGAAGATGTGCGGCTTGGAAACTTGAGAAAGTTCCACATAAGGGAACTCGAGGTCGCGACGAGCAAGTTCAACAGCAAGAACTTGATTGGTAAAGGAGGATACGGGAGTGTGTACAAAGGCTATCTTTCAGATGGTGGGGCCATAGAAGTGAAAAGGCCTAGAGATGGAAGTGCCATTGCAGGAGAGACTCAGTTTCAGACTGAAGTGGAGATGATATGCCTTGCTGTACATCGCAACTTGCTTCGTCTCTATGGATACTGCATCACTCCTACAGAGAGACTCCTCGTTTATCCCTTCATGTCCAATGGTAGTGTTGCTTCTCGTCTCAAAGAACTCAGTGCAACACAGCAGTTTGTCTTCATCACTTACAATGTGTTCATCTTTTCTCACTCCATCCCTCCCCTTACCATTCCATCCCCTCCTCTCCAAAAGTTCCAAAGAAAGCTTTAG 477 0.4549 MMMNSEQMQEDVRLGNLRKFHIRELEVATSKFNSKNLIGKGGYGSVYKGYLSDGGAIEVKRPRDGSAIAGETQFQTEVEMICLAVHRNLLRLYGYCITPTERLLVYPFMSNGSVASRLKELSATQQFVFITYNVFIFSHSIPPLTIPSPPLQKFQRKL 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1392 158 Gene3D Phosphorylase Kinase; domain 1 2 108 - -
Lele51g1392 158 ProSiteProfiles Protein kinase domain profile. 32 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1392 158 Pfam Protein tyrosine and serine/threonine kinase 35 121 IPR001245 GO:0004672|GO:0006468
Lele51g1392 158 SUPERFAMILY Protein kinase-like (PK-like) 9 130 IPR011009 -
Lele51g1392 158 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 124 - -
Lele51g1392 158 FunFam Somatic embryogenesis receptor kinase 1 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1392 Lele-ChrLele51 9747709 9748780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1392 9 119 Receptor kinase-like Gene Family AT5G16000 71.171 2.15e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele51g1392 PK_Tyr_Ser-Thr 1.7e-10 CL0016