Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1375 ATGGCCGCCGCCACCACCACTCTTGCAATAGTCTCCAGATTTTCTATTCATCTGTTCAGCATTCTCTTCAACTACCTCAAGCAAGCTTCTTCCAATTTCAAATGGGTTTTAGAGTTCCTTCTCTACCACCCATTTTACAGCCGTTGTGTTCATCATCATCAACCTCTTCATCAAGAGTTTCAGATGGTTACAGAAGATCGAGTTGAAATATGGCATCCTCGTCGTCGTGAAGGAGAATGCGAAGATGAAGAAGTGGATTGCGCAGTGTGTCTGAACAAGATTAGTGAAGGAGATGAAGTTAAAGTGTTGAGGTGTGAGCATGTTTTTCATAGAGATTGTTTTAATCAATGGGTTGGATTTAGGAACTTTACTTGTCCTCTTTGTAGGGACTTTCTGGGTTCTGGGATTAGGTCTGTTGATGGTGAGGGAGAGGGAGAACCCCGTGTGCTTTTCTTTAACTTTTCTTCGTTTCTTGATAATAATTCTGAACGCGAGAACTGGTGGCTACGGTGA 513 0.4269 MAAATTTLAIVSRFSIHLFSILFNYLKQASSNFKWVLEFLLYHPFYSRCVHHHQPLHQEFQMVTEDRVEIWHPRRREGECEDEEVDCAVCLNKISEGDEVKVLRCEHVFHRDCFNQWVGFRNFTCPLCRDFLGSGIRSVDGEGEGEPRVLFFNFSSFLDNNSERENWWLR 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1375 170 Pfam Ring finger domain 86 129 IPR001841 -
Lele51g1375 170 SMART ring_2 87 128 IPR001841 -
Lele51g1375 170 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 132 IPR013083 -
Lele51g1375 170 SUPERFAMILY RING/U-box 72 132 - -
Lele51g1375 170 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Lele51g1375 170 PANTHER RING ZINC FINGER PROTEIN-RELATED 65 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1375 Lele-ChrLele51 9526266 9526778 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1375 86 134 C3H Transcription Factor Family AT1G15100 57.143 3.24e-14 64.7