Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1374 ATGACTAGTCTTGCAGTAATCACCAGATTTTCTATACAACTCTTCAGCATGCTCTTCAACTTCCTCAAGTTAGCTTATCAAGCATTCAAATGGTTCTTAGATTTCCTTCTCTACCACCCGTTTTACAGCCTTCATGTTCATCATCATCAACCTCTTCATCAAGAGTTTCAGATGGTTACAGAAGATCGAGTCGAAATATGGCGTCCTCGTCGTCGTGAAGGAGGAGGAGGAGAAGAAGAAGTGGATTGTGCAGTGTGTCTGAGCAAGATTGGTGAAGGAGAAGAAGTTAAAGTGTTGATGAGGTGTAAACATGTTTTTCATAGAGATTGTTTGAATCAATGGTTTGATCTCAGGAACTTTACTTGTCCTCTTTGTAGGGATTCTGTGGGTTCTGGGATTAGGAGTGTTGTTCATGGTTTGGGAGGAACAACACATGAGATTTTCTTTAGGTTTTCTTCCCCTAGTAATTCTGAGCGTGAGAATTGGTGGCTGCGCTGA 498 0.4157 MTSLAVITRFSIQLFSMLFNFLKLAYQAFKWFLDFLLYHPFYSLHVHHHQPLHQEFQMVTEDRVEIWRPRRREGGGGEEEVDCAVCLSKIGEGEEVKVLMRCKHVFHRDCLNQWFDLRNFTCPLCRDSVGSGIRSVVHGLGGTTHEIFFRFSSPSNSERENWWLR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1374 165 SMART ringv_2 82 126 IPR011016 GO:0008270
Lele51g1374 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 132 IPR013083 -
Lele51g1374 165 SUPERFAMILY RING/U-box 78 130 - -
Lele51g1374 165 SMART ring_2 83 125 IPR001841 -
Lele51g1374 165 Pfam Ring finger domain 82 126 IPR001841 -
Lele51g1374 165 ProSiteProfiles Zinc finger RING-type profile. 83 126 IPR001841 -
Lele51g1374 165 PANTHER - 18 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1374 Lele-ChrLele51 9517053 9517550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1374 82 131 C3H Transcription Factor Family AT1G15100 60.000 2.78e-14 64.7