Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1349 ATGAAAATAGAGGAAGATCAAGGGCACTGTTCTTCATCTTCTCAAGCCATGAATAACATTCAGAGCTATCAAGAACAGCTTCTTCTTCATCAAATGATGCAGCAGCAGCAAAACGCTGACGTTTTCGGAGGTAATTCTTCTAACAAAAGTAATAATAACAATACTAACAACGAAAGAGGATCGATGCTCCCTGAGGTTTCTCCAATCTATCATCCGCCGCCGCCGCCACAGCCGCCATGGTTTCTCCCTCCGGTTCTCTCGCTCAACCCGGTCCGAGGAGACACCGCCGGCGACCACCAGTTTTTTGTCCCTCCATCACCTTCTTCCTCTTCGCTCTACGCGGACCTCTTCAACCGGAGGGTTCCTTCCCAGCAGTTCGCTTACGATGGTCCGTCCAATTCCGATCATCATCACCACCATCTCCGGATCATCTCCGACACCCTCGGTGTTGGACCCGTTGTGGGTCAACCCGGCTCAGCTGCTCCCTTCGGCCTCCAAGCCGAGCTGGGCAGTATGACGGCTCAAGAAATCACAGATGCCAAAGCTCTCGCGGCTTCAAAGAGCCACAGCGAAGCCGAAAGAAGACGCCGAGAGAGAATCAACAACCATCTCGCCAAGCTTCGAAGCTTATTGCCCAACACAACCAAAACAGACAAAGCTTCGTTATTAGCAGAAGTAATCCAGCATGTGAAGGAGCTGAAGCGTCAAACTTCAATAATAGCAGAAACAAGCCCAGTGCCGACGGAAACCGACGAGTTGACGGTGGATGACGCTTGCGATGAGGACGGCAGGTTCGTGATCAAAGCCTCTCTTTGCTGCGAAGACAGGTCCGATCTCTTGCCGGACCTCATCAAGACGTTGAAGGCCCTAAGGTTGAGAACCGTCAAGGCGGAGATCACCACGCTAGGCGGACGCGTTAAGAACGTCTTGTTCGTGACCGGCGAAGAAGATGAGTTGAGTGCCGGTGGCAGCCGCGGGGAGGAGCAGAGACAGCATCAGCATTGTATAAGCTCCATACAAGAGGCTTTGAAGGCGGTGATGGAGAAGTATGGTGGTGGTGGTGATGAGAATGTGAATGTTAAGAAGCAAAGAACTAATAATAATATCAATATCCTTGAACAAAACAGTGCCATTGCTTGA 1140 0.5096 MKIEEDQGHCSSSSQAMNNIQSYQEQLLLHQMMQQQQNADVFGGNSSNKSNNNNTNNERGSMLPEVSPIYHPPPPPQPPWFLPPVLSLNPVRGDTAGDHQFFVPPSPSSSSLYADLFNRRVPSQQFAYDGPSNSDHHHHHLRIISDTLGVGPVVGQPGSAAPFGLQAELGSMTAQEITDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSIIAETSPVPTETDELTVDDACDEDGRFVIKASLCCEDRSDLLPDLIKTLKALRLRTVKAEITTLGGRVKNVLFVTGEEDELSAGGSRGEEQRQHQHCISSIQEALKAVMEKYGGGGDENVNVKKQRTNNNINILEQNSAIA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1349 379 FunFam transcription factor bHLH30 179 242 - -
Lele51g1349 379 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 240 IPR036638 GO:0046983
Lele51g1349 379 CDD bHLH_AtAIG1_like 179 256 - -
Lele51g1349 379 MobiDBLite consensus disorder prediction 40 75 - -
Lele51g1349 379 Pfam Helix-loop-helix DNA-binding domain 187 233 IPR011598 GO:0046983
Lele51g1349 379 Coils Coil 362 379 - -
Lele51g1349 379 SMART finulus 190 239 IPR011598 GO:0046983
Lele51g1349 379 PANTHER TRANSCRIPTION FACTOR BHLH30 53 371 IPR045847 GO:0003700|GO:0006355
Lele51g1349 379 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 184 233 IPR011598 GO:0046983
Lele51g1349 379 Gene3D - 179 240 IPR036638 GO:0046983
Lele51g1349 379 MobiDBLite consensus disorder prediction 40 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1349 Lele-ChrLele51 9242953 9245747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1349 13 374 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 56.800 1.73e-106 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele51g1349 HLH 2.7e-12 No_clan