Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1338 ATGGGCTTTCGAGAATACATCGAAGCCTTAGAAGATGAAAGCCAGAAAATTCAGATGTTCTCTAAAGAACTTCCGCTTTCACTCGAGCTTGTCTCGCAAGCCATTGAAGCTTATAGGCAACAGCTCTCCACAACGACGGAGCACAATTTTTATGGACAATCGGATTGTTCGGAGCAGACGTCAATGGAAGAAGGACCTGTTCTTGAAGAGTTTATTCCCATTAAGAAAAGGGCTTCCCCTGATTGTGACGACGAAGACGACGACGAAGATGAACAACATTCGCATAAGCCTAAGATTCTCAAGGACAACAATAAGAACTCCGATAAGAAAAAATCCGACTGGCTCAGATCCGTTCAGCTCTGGAACCCAGATCCCTCAACTAAAGAGGATTTGCCGAGAAAAGCTACGGTGGTGGAAGTGAAGAGAAATGGAGGTGCGTTCCAGCCATTTCAGAGAGAAGACAATAATAATGTTGGGAAGACGAACAATAGCAACACATCGGCTGGTAAATCTGCATCTCCGGCTCCGGTGCCTGCAATGAGCTCCTCCTCCGGTGCCGTCGGTGGCGGAAACAAGGGGTCGGAGGAGAAAGAAGGGCAGGGTCCGAGGAAGCAACGGCGGTGCTGGTCACCTGAATTACATAAACGCTTCTTACAAGCCCTTCAACAACTAGGCGGTCCAGATTCTGCAACTCCAAAACAGATCAGAGAGCTCATGAAGGTCGATGGCCTCACAAACGATGAAGTCAAAAGCCACTTGCAGAAATTTCGGTTGCACACAAGAAGACCAAGCTCTATGATTCACAACAATGCTACATCACAAACAGCTCCATTTGTTCTTGTTGGCAACATTTTTGTGCAACCACCGGAATATGCGGCTGCGGTGGCGACTTCAACAGCATCAGGTGAGGTAACTACGGTCACCACCCCGGCCGGGATTTACGCCCCGGGGGTGGCTCATCCCCCTACGGCGGCTCCTCCTATGCCGGTGGTGAAGCGATTGGAGCAGCCGCATTCGGATGAAGAAAGGGTGAATCATAGTAGTGAAGGAGCTGTGCATTCAAATTCTTCCCCTGATTCATCGTCTTCCACACACACCACTTCTCATTCTCATGGATATTGA 1122 0.4893 MGFREYIEALEDESQKIQMFSKELPLSLELVSQAIEAYRQQLSTTTEHNFYGQSDCSEQTSMEEGPVLEEFIPIKKRASPDCDDEDDDEDEQHSHKPKILKDNNKNSDKKKSDWLRSVQLWNPDPSTKEDLPRKATVVEVKRNGGAFQPFQREDNNNVGKTNNSNTSAGKSASPAPVPAMSSSSGAVGGGNKGSEEKEGQGPRKQRRCWSPELHKRFLQALQQLGGPDSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRPSSMIHNNATSQTAPFVLVGNIFVQPPEYAAAVATSTASGEVTTVTTPAGIYAPGVAHPPTAAPPMPVVKRLEQPHSDEERVNHSSEGAVHSNSSPDSSSSTHTTSHSHGY 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1338 373 MobiDBLite consensus disorder prediction 334 348 - -
Lele51g1338 373 FunFam Myb family transcription factor 203 261 - -
Lele51g1338 373 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 350 IPR044787 GO:0003700|GO:0006355
Lele51g1338 373 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 204 259 IPR006447 GO:0003677
Lele51g1338 373 MobiDBLite consensus disorder prediction 318 373 - -
Lele51g1338 373 MobiDBLite consensus disorder prediction 91 115 - -
Lele51g1338 373 MobiDBLite consensus disorder prediction 149 189 - -
Lele51g1338 373 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 201 261 IPR017930 -
Lele51g1338 373 Pfam Myb-like DNA-binding domain 206 255 IPR001005 -
Lele51g1338 373 MobiDBLite consensus disorder prediction 349 373 - -
Lele51g1338 373 MobiDBLite consensus disorder prediction 74 208 - -
Lele51g1338 373 SUPERFAMILY Homeodomain-like 202 262 IPR009057 -
Lele51g1338 373 Gene3D - 203 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1338 Lele-ChrLele51 9111272 9113013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1338 5 254 G2-like Transcription Factor Family AT1G25550 55.731 1.15e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele51g1338 Myb_DNA-binding 1.9e-06 CL0123