Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1324 ATGGCCTCCGACGCACATGGTTCCCGTCGCAAGCACCGGCGCTCATCTTCTCCCGAAGAAGTCGAGCGATCTTCGAAGCGTCACAAGCACCGCCACCATGGCCACCGCCATCATAGGCACCGCCACGGTAGCAGGAAACACGAAGAAGAAGTTGAAATCGATTCCAAAACTGTTGATAATGTTCCTTCTCCAACTCTTTCTCCTAATTCTGATCCGAACATCCCTCGCCCTGATGATGATGTGGAGGAGGGGGAGATTCTTGAAGACGAGGGTTCCGGTGGCCGAGATGGTGAGATTGGAAAAAAGCATACGGAGTCCGATGCTGAGTCTGGTGAAATTATGGCCGCGGGAGGTCGAGGTATTCGATCTGATAATTCAAATCTGGTACCTTTCACAGAAGAGATGTTGCATCGGAAAGATGTCAGTCCTTCTAAAGAGACTGTAGGGATCAATGCTAAAGGTTCACAAACTAATAATGAGGATATCAGCAATGGTAGATTTATTAGTCCAGGATTGGATGGAGAAGATGATACTTGCCATCAGAGACACACTGGTTATAGTATAAATGGAGTTGATGGTTCTTGTACTCATTCAAGTGCTGAGTCTCTAGATGTTAAGCATGCTAGAGCTAGTTCAGATGGTTTGGGCAATGGGTATTTGGATCGTAAATCTTCTAAAGAGGATAAATGGCAGCATGGGGAGCTCGGATGTTCTAACGGAAATGAGAAGCTGAAAGGTGACTATGGTAATGAAGATCTGGAGGTTAATGGAGGCAAAGTAAGGATTCATAGAAAGAACTCCTCCCCTGAAAGTGGAGGCGGCAAACATAGGACCAGAGAAAGCTCACCTAGTCATAGACGTAGGAGTCGATCCAGATCAATTGGTCATAATCATAGTGTAATGGAAGAATATGCTCATTCCAGGAGAAGGAATGATGAGGAAAGAATTGGGGACTATGACAGGGACCGTGAACATGTCTGTAGAGATTTGACGGCTGGTGATAGAAGGGAGCGTAGTTTCAGTTATTACAGTCGCGAGGCCCAAGATAGAGATAGGAGCAAGGACAGGGATGGGGATAGGTACCTAAGAAGGGAAAAGGAGCGAGAAAGGAGCCGAAATAGGGAGGATGACCGTGTGCATAGGAGGGAAAAAGAACGTGAAAGGAGTCATGAGAAGGATAGAAGGGATGTGGAAAAAGATAGGAGCAGGGGAAGAGAGGTGGACAGGTATAGAAGAAGAGAAAAGGAGCAAGATAGAGATAGGAGCTGGGAGATAGGGGCTGAGCGGGAAAGAAGTGATAGGGGAAGAGAGAGGAGCAGGGACAGAGCAAGGGTTGGAGAGAGAGATAGAGTTCGGGAGAGTGAAAGGGATGATAAGCATCGAGAAAGAGATAAGATTAAGGAGAGGGAGAGGGAGAGGCATAAGGATAGAAACACTCTTGATAAAGTTAAAAATCTGGGTTATGAGTATAGTCATGATAGCCGGGACAGAGATATATGCTCTAAGCATTCTAGACATGAAGAAACAGAAAGCTATCGGGAGAGACAGAGAAATTCTGAGTCTGTGAAAGTTGATAACCCTGTGGACAGAGGCGAGGATGAACAAGATGACTTAGATGATACAGTTACGTTGCAATTTGCTGAACAAGAAGAGGAAGATCTCAATAGAATTAAGGAGGAGAGTAGGAGGAGGAGGGAAGCAATCTTAGAGAAATATAAAAAGCAGCAACCACAGCAGCATCAACAAGCAGAACAAACTTCTGAAAATAAAGAAAAAGATAAGGATCCTGTGAATATTCCGGCTGCTGTTTCTGAAGCTCCTGATGCTAAGAATGATGGTGTTGATGTTTTTGAAGTGGAACCATCTTTCAATGTTGGTAAATCTCCTCGAGAAAATGGAAATGATTCATCTGAAAAGATCCCTGGTGTTGCTAGGGGCTTGGGAGAGGGTACTCCGAAGAGTGAAAGATCCGATGACAAGTTTTGTGATGACATATTTGGTGAGACACCAACAGGAGTTCGCAAAGCGGGCAAAGGGGATGGATTGCGTGTTGACAGGGGTGGATTGCATGACAATTGGGATGATGCGGAGGGGTATTACAGCTATCGTTTTGGCGAAATACTTGATGGTCGATATGAAGTTATTGCAGCTCATGGTAGAGGTGTCTTTTCAACAGTTGTTCGTGCAAAGAATCTCAAGTTTGGTAATGGTGAGCCAGAAGAAGTAGCTATAAAAATTATTCGCAATAATGACACTATGTACAAGGCTGGTATGGATGAGTTGGTCATACTAAAGAAATTAGTAGGTGCAGATCCAGAGGATAAGCGTCATTGTGTTCGTTTCCTTTCGAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTCATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCGTACGCGAAACAACTTTTTATAGCATTGAAGCATCTTCGGAACTGTGGTGTTCTTCATTGTGATATAAAGCCAGACAATATGTTGGTGAATGAGGCTAAAAATGTTTTGAAGCTTTGCGACTTTGGTAATGCTATGTTTGCTGGAAAGAATGAAGTTACACCATACCTTGTGAGTCGTTTTTATCGTGCTCCTGAAATAATACTTGGCTTGGCATATGATCATCCGTTGGATATCTGGTCTGTAGGCTGTTGCTTGTATGAACTCTATGCTGGAAAAGTTCTTTTCCCAGGTCCTTCTAACAATGACATGCTACGGCTTCACATGGAATTGAAGGGACCTTTTCCAAAGAAGATGCTTCGCAAGGGAGCATTTATTGATCAGCATTTTGACCAGGACTTGAATTTTCTTGCTACAGAAGAGGATCCAGTGACGAAAAAGGCTATAAGGCGGTTGATTCTCAACATAAAGCCCAAAGATATTGGAACTATCATTGCTGGCTCTCCTGGAGAGGATCCAAAGATGTTAGCCAATTTCAAAGATCTTCTGGACAAGGTTTTTGTCCTGGATCCAGAGAAGAGGTTGACAGTCTCACAAGCATTAAGCCACCCATTCATCACTGGCAAGTGA 3093 0.4384 MASDAHGSRRKHRRSSSPEEVERSSKRHKHRHHGHRHHRHRHGSRKHEEEVEIDSKTVDNVPSPTLSPNSDPNIPRPDDDVEEGEILEDEGSGGRDGEIGKKHTESDAESGEIMAAGGRGIRSDNSNLVPFTEEMLHRKDVSPSKETVGINAKGSQTNNEDISNGRFISPGLDGEDDTCHQRHTGYSINGVDGSCTHSSAESLDVKHARASSDGLGNGYLDRKSSKEDKWQHGELGCSNGNEKLKGDYGNEDLEVNGGKVRIHRKNSSPESGGGKHRTRESSPSHRRRSRSRSIGHNHSVMEEYAHSRRRNDEERIGDYDRDREHVCRDLTAGDRRERSFSYYSREAQDRDRSKDRDGDRYLRREKERERSRNREDDRVHRREKERERSHEKDRRDVEKDRSRGREVDRYRRREKEQDRDRSWEIGAERERSDRGRERSRDRARVGERDRVRESERDDKHRERDKIKERERERHKDRNTLDKVKNLGYEYSHDSRDRDICSKHSRHEETESYRERQRNSESVKVDNPVDRGEDEQDDLDDTVTLQFAEQEEEDLNRIKEESRRRREAILEKYKKQQPQQHQQAEQTSENKEKDKDPVNIPAAVSEAPDAKNDGVDVFEVEPSFNVGKSPRENGNDSSEKIPGVARGLGEGTPKSERSDDKFCDDIFGETPTGVRKAGKGDGLRVDRGGLHDNWDDAEGYYSYRFGEILDGRYEVIAAHGRGVFSTVVRAKNLKFGNGEPEEVAIKIIRNNDTMYKAGMDELVILKKLVGADPEDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLAYDHPLDIWSVGCCLYELYAGKVLFPGPSNNDMLRLHMELKGPFPKKMLRKGAFIDQHFDQDLNFLATEEDPVTKKAIRRLILNIKPKDIGTIIAGSPGEDPKMLANFKDLLDKVFVLDPEKRLTVSQALSHPFITGK 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1324 1030 MobiDBLite consensus disorder prediction 88 109 - -
Lele51g1324 1030 PANTHER DUAL SPECIFICITY PROTEIN KINASE 414 1028 - -
Lele51g1324 1030 Pfam Protein kinase domain 713 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1324 1030 FunFam serine/threonine-protein kinase PRP4 homolog 683 771 - -
Lele51g1324 1030 MobiDBLite consensus disorder prediction 295 530 - -
Lele51g1324 1030 MobiDBLite consensus disorder prediction 148 165 - -
Lele51g1324 1030 ProSiteProfiles Protein kinase domain profile. 712 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1324 1030 CDD STKc_PRP4 711 1027 IPR044092 GO:0004674|GO:0006468|GO:0045292
Lele51g1324 1030 FunFam Serine/threonine-protein kinase PRP4 homolog 772 1028 - -
Lele51g1324 1030 SMART serkin_6 712 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1324 1030 MobiDBLite consensus disorder prediction 245 279 - -
Lele51g1324 1030 MobiDBLite consensus disorder prediction 280 294 - -
Lele51g1324 1030 MobiDBLite consensus disorder prediction 549 573 - -
Lele51g1324 1030 MobiDBLite consensus disorder prediction 26 44 - -
Lele51g1324 1030 SUPERFAMILY Protein kinase-like (PK-like) 699 1029 IPR011009 -
Lele51g1324 1030 Gene3D Transferase(Phosphotransferase) domain 1 772 1028 - -
Lele51g1324 1030 Coils Coil 452 472 - -
Lele51g1324 1030 MobiDBLite consensus disorder prediction 183 201 - -
Lele51g1324 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Lele51g1324 1030 MobiDBLite consensus disorder prediction 531 547 - -
Lele51g1324 1030 MobiDBLite consensus disorder prediction 1 662 - -
Lele51g1324 1030 Coils Coil 544 567 - -
Lele51g1324 1030 Gene3D Phosphorylase Kinase; domain 1 683 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1324 Lele-ChrLele51 8979908 8988524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1324 719 1028 MAP Kinase Gene Family AT4G01370 33.125 6.78e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lele51g1324 Pkinase 5e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1324 51 8979908 8988524 Lele51g1324 51 8979908 8988524 ECH
Lele49g1317 49 9010375 9016985 Lele51g1324 51 8979908 8988524 hybridization
Lele50g1511 50 20251686 20258210 Lele51g1324 51 8979908 8988524 hybridization