Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1300 ATGGAGAAAAATCCGTCATCCAATATTCAAGAATTCATGTCTTTCTTCAATGGTTCCTTCTCGGATCAACACCTTAATAATCTCCCTCTGCTCCACACCAATCATCTTAATCCGCGGTCTGTTCATAATCATGAAGAAACCTTGCTGGATTCTTCTCCTCCATTTTCTGCACCTTCTTCTTCTGCTCACAAGAACAAGAGCAAAAGGAAGAGAAACAGTGGAAGATTTGAGGTTGAAGAGAAAGCAAAAGATGTCATCCATGTAAGAGCCAAAAGAGGCCAAGCAACTGATAGCCACAGTTTAGCAGAAAGGGTGAGAAGAGAGAAAATCAACGACAAGCTAAGATGTTTGCAAGAATTAGTTCCAGGCTGCTACAAGACAATGGGTATGGCAGTAATGTTAGATGTGATCATAGATTATGTTCAATCTCTGCAACAACAGATTGAGTTTCTTTCCATGAAGCTTACAGCAGCAACCATGCATTATGATTTCCACGCTTCTGAGTTCAATTGGAATAATAATAATACAAGTATGGAGAAGATGGGAGAAGAAGGCTATGGTGGAGGGTCGTCGTACTCTTATTTCAATCCAACTTGGCTGCCACCTCATTAA 612 0.4052 MEKNPSSNIQEFMSFFNGSFSDQHLNNLPLLHTNHLNPRSVHNHEETLLDSSPPFSAPSSSAHKNKSKRKRNSGRFEVEEKAKDVIHVRAKRGQATDSHSLAERVRREKINDKLRCLQELVPGCYKTMGMAVMLDVIIDYVQSLQQQIEFLSMKLTAATMHYDFHASEFNWNNNNTSMEKMGEEGYGGGSSYSYFNPTWLPPH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1300 203 CDD bHLH_AtBPE_like 84 169 - -
Lele51g1300 203 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 92 163 IPR036638 GO:0046983
Lele51g1300 203 Pfam Helix-loop-helix DNA-binding domain 98 145 IPR011598 GO:0046983
Lele51g1300 203 SMART finulus 100 150 IPR011598 GO:0046983
Lele51g1300 203 FunFam Transcription factor BEE 3 94 157 - -
Lele51g1300 203 Gene3D - 90 163 IPR036638 GO:0046983
Lele51g1300 203 MobiDBLite consensus disorder prediction 47 62 - -
Lele51g1300 203 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 94 144 IPR011598 GO:0046983
Lele51g1300 203 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 59 170 IPR024097 GO:0006355
Lele51g1300 203 MobiDBLite consensus disorder prediction 43 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1300 Lele-ChrLele51 8721159 8722277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1300 5 166 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 55.422 2.91e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele51g1300 HLH 1e-05 No_clan