Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1294 ATGGAGGATCGCCAAATTCTCTACCCTTCTAAACCAGCAAACCCCTTAAAGCTTTTCGGCTTCAGCGTCCATAGCCGCCACCACCCACACGTACTCCATCAAGTTGAAGAAGACGACGCAGTGCTTGCAGATGATGTCTCAGGCCCAATCTCCAAGCCAACTTCCCCATCTGGATCGCCGGATTCCGCCGCATCCGCCGGTGCCGGACCTTTCCCTGCTTCCTCCGGCGACAGGAAATACGAGTGTCAGTATTGTTGTCGCGAGTTTGCCAACTCTCAGGCCCTCGGTGGCCATCAGAACGCTCACAAGAAAGAGCGCCAGCAGCTGAAGCGGGCCCAGTTACAAGCCTCACGAAACGCCGCCGTTTCGTTCGTGAGGAATCCAATAATCTCTGCCTTCGCCCCTACGCCTCATTTGCTTTCTTCGGCTGGCCACGTCATGGTTCCGGCAGCTACTAATCCGTCGTCCTGGGTCTATGTCCCGCCACGTGCCGCTCGTCCGCCGTTTCACGTGTCGGTATCACACGGGTGCGTGTTCCCTTCGTCGACGAATAGTACTACTATCGGTAGTACTAATAGTAATCAGAGGGGGAGATCGACAGGCGGTGGGATGTTCTCCTGTGGTGGCAGCGCAGGGGAGTCCATGGGATCTCAAGAACATGGTAGGGCCCATGGGCCCTCTTTAAGTAGATTTTCAAAAGCGGATGGTGGGCCCAACTTCGATGAGCCATTGGGCTTGGACTTGCATCTAAGCCTCGCGCCAGCCGAGCCGTGA 774 0.5633 MEDRQILYPSKPANPLKLFGFSVHSRHHPHVLHQVEEDDAVLADDVSGPISKPTSPSGSPDSAASAGAGPFPASSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVSFVRNPIISAFAPTPHLLSSAGHVMVPAATNPSSWVYVPPRAARPPFHVSVSHGCVFPSSTNSTTIGSTNSNQRGRSTGGGMFSCGGSAGESMGSQEHGRAHGPSLSRFSKADGGPNFDEPLGLDLHLSLAPAEP 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1294 257 PANTHER ZINC FINGER PROTEIN 5 12 256 IPR044299 GO:0010090
Lele51g1294 257 FunFam Zinc finger protein 6 72 130 - -
Lele51g1294 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 80 107 IPR013087 -
Lele51g1294 257 MobiDBLite consensus disorder prediction 45 72 - -
Lele51g1294 257 MobiDBLite consensus disorder prediction 184 201 - -
Lele51g1294 257 Gene3D Classic Zinc Finger 69 127 - -
Lele51g1294 257 SUPERFAMILY beta-beta-alpha zinc fingers 76 107 IPR036236 -
Lele51g1294 257 MobiDBLite consensus disorder prediction 184 257 - -
Lele51g1294 257 ProSitePatterns Zinc finger C2H2 type domain signature. 82 102 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1294 Lele-ChrLele51 8650645 8651418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1294 16 255 C2H2 Transcription Factor Family AT1G68360 43.866 1.85e-49 161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1294 51 8650645 8651418 Lele51g1294 51 8650645 8651418 ECH
Lele49g1285 49 8671295 8672065 Lele51g1294 51 8650645 8651418 hybridization
Lele50g1544 50 20646507 20647271 Lele51g1294 51 8650645 8651418 hybridization