Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1291 ATGGCGGCAACCCTTTACTTGGCTACCTTATTCTCTACACTTTTCCGTTTTCTTCTTCTTGTTCAGAGCTCCAAAAACCATGACTTGGAAGCTCTCATGGCGTTTAGAACTGCTTCAGATACGTTCAACAAGCTCTCAACTTGGAACTCCAGCACTGACCCTTGTTCTTCTTGGTCCGGCGTCTATTGCCTCCATAACAGAGTCTCGCGTCTTATTCTCGAAGACCTTGATCTCCGAGGCTCTTTCGAACCCTTGACTTCTCTAACCCAGCTTCGAGTCCTGAGCCTGAAGCGGAACAGCCTCTCCGGCCCCATTCCGAGTCTTTCCAATTTCACGGCCCTGAAACTTCTGTATCTCTCTTACAATGAGTTTTCCGGTGGCTTCCCGGCGACTGTTACGTCGCTTTTCCTCTTGTACCGTCTTGATCTGTCTCACAATAACTTGTCCGGCGAGATTCCCGCGACGGTCAACCATTTGACCCACATTCTCACTCTCCGTCTACATGAGAACCGTTTCTCCGGCAGAATTCCCAGTCTTGACCTTGCTAGCCTGCAAGACTTCAATGTCTCCGGGAACCGTCTCTCCGGCGAAATACCCAAATCACTGTCCGGTTTCCCCGAATCGAGTTTCGCTCAAAACCCGTCTCTTTGCGGAGCTCCGATGCAGAAATGTACCAACTTTGTAGACAAACCCAGCAAACCCGGATCTGAAGGAGCCATTGCGTCGCCACTAACGCCGCGAAGCAACCCAAGAGCACCAACTATAGCATCCACACCGAGCTCAATGCCTGGAAATGCCGCAACACCGCCCAGAAAATCCAACTCATCAGCAAAAATAAGCCCCATAGCTCTAATCGCCATTATTCTCGGCGACATTGTGGTTCTCGCGGTGGTCTCTCTTCTTCTCTACTGCTACTTCTGGCGAAACTACGTTGGGAAATTGAAAGAAGGAAAAGGTTCGAAGCTAATGGAGAGCGAGAAAATCGTGTATTCATCAATCCCGTATCCTGTTCATTCGGGTTTTGAGAGGGGTCGAATGGTGTTATTCGAAGGGGTGAAGAAGTTCGAGCTAGAGGATTTGCTTAAAGCTTCAGCGGAAATGTTGGGAAAAGGTGGGTTCGGGACGGTGTACAAGGCGGTTCTGGATGATGGAAGCGTCGTCGCTGTCAAGAGGCTCAAAGACGCTCAAATTGGAGGGAAGAAAGAGTTCGAACAACACATGGAAATTCTGGGAAGATTGAGACACCCAAATATTGTTCATTTGAGAGCTTACTATTCTGCCAGAGACGAGATTTTGCTCGTCTCCGATTACATGCCTAACGGAAGCTTGTTTTGGCTTCTTCATGGTAACAGAGGACCTGGCCGGACCCCACTGGAATGGACCACAAGGCTTAAAATAGCAGCCGGAGCGGCGCGTGGAGTTGCTTTTATTCACAGCTCATGCAAGACGCTTAAACTCACCCACGGTAACATCAAATCCACAAACATCCTCCTCGACAGGGCGGGAAACCCGCGCGTGGCAGATTTCGGGCTCTCCATCTTTGCTGGCCCAACGGCCACAGCCGCTACGAAATCTAACGGCTACCGTGCCCCTGAGGCATTTGACGGTCGGAGATGCACTCAGAAATCCGACGTGTACTCCTTTGGCGTCGTCCTGCTGGAGATTCTCACCGGGAAATGCCCCTCCGCCGTGGACGGCGGCGGGTATGGTGGTAGCGCGGTGGTTGATCTTCCGAGGTGGGTACAGTCAGTAGTGAGGGAGGAATGGACGGCTGAGGTTTTCGATCTTGAGCTGGTGAGGTACAAAGATATTGAGGATGAGATGGTGGGGATGCTTCAGATTGCTCTGGCTTGTACCGCCGCTGCGCCTGATCAACGGCCCAGCATAAGCCACGTGGTCAAGATGATCGAGGAGCTTCGTGGGGTCGAGGGGGGACCAGGTCATGACACGTCGGGCTCTGTTTCTAATTCACCTTCCGTGTCTGAAGATGCTTCTTGA 1998 0.515 MAATLYLATLFSTLFRFLLLVQSSKNHDLEALMAFRTASDTFNKLSTWNSSTDPCSSWSGVYCLHNRVSRLILEDLDLRGSFEPLTSLTQLRVLSLKRNSLSGPIPSLSNFTALKLLYLSYNEFSGGFPATVTSLFLLYRLDLSHNNLSGEIPATVNHLTHILTLRLHENRFSGRIPSLDLASLQDFNVSGNRLSGEIPKSLSGFPESSFAQNPSLCGAPMQKCTNFVDKPSKPGSEGAIASPLTPRSNPRAPTIASTPSSMPGNAATPPRKSNSSAKISPIALIAIILGDIVVLAVVSLLLYCYFWRNYVGKLKEGKGSKLMESEKIVYSSIPYPVHSGFERGRMVLFEGVKKFELEDLLKASAEMLGKGGFGTVYKAVLDDGSVVAVKRLKDAQIGGKKEFEQHMEILGRLRHPNIVHLRAYYSARDEILLVSDYMPNGSLFWLLHGNRGPGRTPLEWTTRLKIAAGAARGVAFIHSSCKTLKLTHGNIKSTNILLDRAGNPRVADFGLSIFAGPTATAATKSNGYRAPEAFDGRRCTQKSDVYSFGVVLLEILTGKCPSAVDGGGYGGSAVVDLPRWVQSVVREEWTAEVFDLELVRYKDIEDEMVGMLQIALACTAAAPDQRPSISHVVKMIEELRGVEGGPGHDTSGSVSNSPSVSEDAS 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1291 665 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 438 644 - -
Lele51g1291 665 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 640 - -
Lele51g1291 665 CDD STKc_IRAK 368 639 - -
Lele51g1291 665 MobiDBLite consensus disorder prediction 649 665 - -
Lele51g1291 665 FunFam Nuclear pore complex protein NUP107 25 178 - -
Lele51g1291 665 MobiDBLite consensus disorder prediction 641 665 - -
Lele51g1291 665 SUPERFAMILY L domain-like 36 220 - -
Lele51g1291 665 Gene3D Phosphorylase Kinase; domain 1 341 437 - -
Lele51g1291 665 Gene3D Ribonuclease Inhibitor 20 85 IPR032675 -
Lele51g1291 665 Gene3D Ribonuclease Inhibitor 86 227 IPR032675 -
Lele51g1291 665 MobiDBLite consensus disorder prediction 247 275 - -
Lele51g1291 665 Gene3D Transferase(Phosphotransferase) domain 1 438 644 - -
Lele51g1291 665 Pfam Protein kinase domain 366 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1291 665 MobiDBLite consensus disorder prediction 232 275 - -
Lele51g1291 665 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Lele51g1291 665 SUPERFAMILY Protein kinase-like (PK-like) 366 636 IPR011009 -
Lele51g1291 665 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Lele51g1291 665 ProSiteProfiles Protein kinase domain profile. 362 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1291 Lele-ChrLele51 8610737 8613392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1291 28 664 Receptor kinase-like Gene Family AT1G68400 65.231 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele51g1291 Pkinase 4.4e-41 CL0016