Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele51g1287 | ATGTCTGTCTGCGTGCTCCGCAAATCAAGGTGCAGATCTAACTGCGAAGTAAGGAAATACACAGAGGAGAAGAACGGAAGATATCAACTCTCAGATACGATACGCGTATTGATGACAAGCTCCACAAATTTTGCAGGAACGTTTGCTTTAACATTGAGAAAGCATGAACAAACTCTCAAGTCCGCACCTTTTAGCATCAGGCTTTTTCCCATTCCAAGTCCTTTTGTTCTCGCCCACATCGTTCTTAGACCAATTCACCGCTTCAATAAACCCTTCGGAGAAGTTAAAAGCAAATTCAATAGCCCTTCTTCTGGGATATTCGATACCCCAATAATTGCGGGATGTAATGGTAAATCTCATGGTGGTAATCAAAGCACCAGAGATGTCATCTGCAACCCGGGTGCTGGAGCTGCTGCTGGTAAGTTTGTCAATTTTGAGCTCAGTTTTATTGCGTTCTTGTTGTTTTCTTCATTTCTCATTCCAATCGCTGAAGGTAGTGTCATCATCACAAGCTTGCAGAATATAGTCAGGAATGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCCCCAACAATAATAGCATTACTTCAAAACTGGGCTGTGTACTTCACAGTTTATGGTCAACTGAAAGGCCTTTTCCTATCACAAGCAGATAGTTGCAACCAATTATCAACTATTGAAAATATGGTAGCTGCTGCTGGTGCTGGGGCAGCAACAGCAGTTTCAACAAATCCATTGTGGGTTGTTAAGACCATACTCCAAAGGATAATGCACGAGGAAGGCATACGAGGACTGTATAGTGGCATAGTGCCTTCCTTGGCTGGTGTAAGTCATGTTGCAATTCAGTTCCCTGCATATGAAAAGATCAAATCGTACATGGCGAAAAAGGTGAAAATTTCGAATGCTTCAACCGAGGATACGACCGTTGACAAACTTGGTCCAGGAAAGGTTGCCATTGCATCCTCAATTTCAAAAGTAATTGCCTCTGTAATGACTTATCCACATGAGGTGATACGTTCAAGGCTGCAGGAGCAAGGCCAGGTGAAAAGTGCCGGGGACCGTTGTGCCGGGCTCTTTGACTGTTCTAGGAAGGTGTTCCAGAGTGAAGGCCTTCCCGGCTTCTATAGAGGTTGTGCGACGAATTTACTAAGAACAACTCCATCAGCTGTAATTACATTCACCAGCTTTGAGATGATACACAGGTTTCTGCAACGTGATGTAACTCAGGAAATAGGGCACTCACAAGGGTCTCGTAAACCAGATGACCTTAACAAGCCCAAGCAAAAGACAGTGACATAA | 1299 | 0.4396 | MSVCVLRKSRCRSNCEVRKYTEEKNGRYQLSDTIRVLMTSSTNFAGTFALTLRKHEQTLKSAPFSIRLFPIPSPFVLAHIVLRPIHRFNKPFGEVKSKFNSPSSGIFDTPIIAGCNGKSHGGNQSTRDVICNPGAGAAAGKFVNFELSFIAFLLFSSFLIPIAEGSVIITSLQNIVRNEGFRGMYRGLSPTIIALLQNWAVYFTVYGQLKGLFLSQADSCNQLSTIENMVAAAGAGAATAVSTNPLWVVKTILQRIMHEEGIRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYMAKKVKISNASTEDTTVDKLGPGKVAIASSISKVIASVMTYPHEVIRSRLQEQGQVKSAGDRCAGLFDCSRKVFQSEGLPGFYRGCATNLLRTTPSAVITFTSFEMIHRFLQRDVTQEIGHSQGSRKPDDLNKPKQKTVT | 432 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele51g1287 | 432 | Gene3D | Mitochondrial carrier domain | 163 | 253 | IPR023395 | - | |
| Lele51g1287 | 432 | Gene3D | Mitochondrial carrier domain | 254 | 408 | IPR023395 | - | |
| Lele51g1287 | 432 | Pfam | Mitochondrial carrier protein | 168 | 215 | IPR018108 | - | |
| Lele51g1287 | 432 | Pfam | Mitochondrial carrier protein | 253 | 296 | IPR018108 | - | |
| Lele51g1287 | 432 | Pfam | Mitochondrial carrier protein | 312 | 405 | IPR018108 | - | |
| Lele51g1287 | 432 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 312 | 402 | IPR018108 | - | |
| Lele51g1287 | 432 | MobiDBLite | consensus disorder prediction | 415 | 432 | - | - | |
| Lele51g1287 | 432 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 223 | 292 | IPR018108 | - | |
| Lele51g1287 | 432 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 127 | 212 | IPR018108 | - | |
| Lele51g1287 | 432 | SUPERFAMILY | Mitochondrial carrier | 168 | 398 | IPR023395 | - | |
| Lele51g1287 | 432 | MobiDBLite | consensus disorder prediction | 410 | 432 | - | - | |
| Lele51g1287 | 432 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 165 | 408 | IPR044712 | GO:0006862|GO:0055085 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele51g1287 | Lele-ChrLele51 | 8590180 | 8597553 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele51g1287 | 165 | 422 | Chloroplast and Mitochondria Gene Families | AT1G25380 | 61.372 | 4.02e-108 | 322 |