Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1283 ATGGCTCTGGCTTTTGAGTTTCGTTTCCTCTTGATTTCTCACCTTTTACTTCTTTCAATTAGGTATGGAAATGCAAGGCATGTTAAGTGTCCTAGATCTTTTAATTGCGGAGAACTTGGGAGCCTCCAGTTCCCTTTCACCAAGCCAGAATTGCCAGACTGTGGCTTAATGGTGGTTCATCACTGTGATGATTTGGATCCACATTCAATTAAAAAGATTGAACTAGAGAAGAATGGAAGATCATTCTTGCAGCTTAACGGTGTTTTTCTGCAGCAAAATATGATTACGGTTTTTGACCAAGATCTACACAATCGTCTTCAATCCAGTGGTTCTTGTCTAGCTTTCAACAACAGCATCCCAATTCCTGCAAGCTCTCCTTTGATCTCTTTAGATATTAAATACAACATAACCCTGTTTAAATGCGACCACAAGATCAATGTCAGCACCCCCACTGGTTTTATTAAACATCCTTGTGCAAACTTCGATATCTATCATTACAGCCGACTCCAAGATCTTCAACCTGACCAAAAAAGCCATTTCTCAGCATGTTCAACTCGTGTGCTTCCAAAAAAAGACCTGCCTGATAGCAAAGACCTTCAATCATTCTTATCTGCTCAAATGACTCTGGATATACGACTATCTGATGCTTGTGATAAGTGTCGCAACAGCAAAGGACAGTGTCAACTTGACAGAAACAAGAACTTCTGCTACATCAAAGCTGCACCTGATAGGAGTAAAATTTGGAAGCTGGCACTGGGACTTGGGCTAGGTTTATTTATTGCACTTCTAGGCATTTTGATAAGTTGTTGGCTACTAGGGCGGTATTACAAACGAAAATATTCATCTTCAAACGTCCAATTGCAATTACCGAGAAATAATACAATTGATTCCTACCCCAATGTAGACCCAGAAAGGAGCAGAACCTACTTGGGGGTACCCCTCTTCTCTTACAAGGAGCTTGAGAAAGCAACAAATAACTTCAGTCATTCAAGAGAATTGGGAAATGGAGGATTTGGGTCTGTTTACCATGGAAAGCTCCAAGATGGACGTGAAGTTGCAGTTAAGCGCCTATATGACCACAACTATTGGAGAGTAGAACAATTCATGAATGAAATTGAGACTCTAACTCGCTTGCGCCATCAAAACCTTGTGTACCTTTATGGTTGCACATCATGTCATAGCCGTGAACTCCTCCTTGTGTATGAATACATTCCAAACAAAACAGTTTCTTGTCATCTCCATGGTGAATTAGCTGATTCTGGTTTACTACCATGGCCTAGAAGAATCAAAATTTCCATACAAACTGCAACCGCATTGGCTTTCCTCCATGCTTCCAACACCATTCATCGGGATGTCAAAACTAACAATATCCTTCTTGACGACAACTTCTCAGTTAAGGTTGCAGATTTTGGGCTTTCGAGGTTGTTTCCTGATGATGTTACCCATGTTTCCACTGGCCCACAAGGGACCCCTGGGTATGTGGATCCAGACTATCAACAATGTTACCAGCTTACTAGCAAAAGTGATGTGTATAGCTTTGGGGTTGTGCTTATTGAGCTGATATCATCTATGCCAGCAGTTGATATGAGCAGGCCTAGAGATGAGATAAATCTGGCAAATCTAGCTGTAAGTAAGATTCAGAAAAGTGCATTTGAGGAGTTGGTGGATCCTTGTCTTGGTTTTGAGTCAGACAGAGAGGTGAGGAGGATGATAGCTTCAGTGGCAGAGTTGGCTTTTCAATGTTTACAAAGGGACAAGGAATTGAGACCTTCCATGGATGAGGTTTTGGAGATTCTAAAGAGAATTGAGATTGGGAATGAGAAGTTTGATCATCTTGAAGAAGTGAATAGTAATCGTGCTGTCGGTATATTACATAGCGGTCCTATTCATACGCCATCATCACCACCTTCACCGGATTGTGTTGAGTATGGATTGCAGAAGAGTATGAAGTCATTGCCTTCACCTAAAGCTGTTACTGATAAATGGCATAGTGAATCAACTACAACTCATGGAAGTGTCTAA 2022 0.4115 MALAFEFRFLLISHLLLLSIRYGNARHVKCPRSFNCGELGSLQFPFTKPELPDCGLMVVHHCDDLDPHSIKKIELEKNGRSFLQLNGVFLQQNMITVFDQDLHNRLQSSGSCLAFNNSIPIPASSPLISLDIKYNITLFKCDHKINVSTPTGFIKHPCANFDIYHYSRLQDLQPDQKSHFSACSTRVLPKKDLPDSKDLQSFLSAQMTLDIRLSDACDKCRNSKGQCQLDRNKNFCYIKAAPDRSKIWKLALGLGLGLFIALLGILISCWLLGRYYKRKYSSSNVQLQLPRNNTIDSYPNVDPERSRTYLGVPLFSYKELEKATNNFSHSRELGNGGFGSVYHGKLQDGREVAVKRLYDHNYWRVEQFMNEIETLTRLRHQNLVYLYGCTSCHSRELLLVYEYIPNKTVSCHLHGELADSGLLPWPRRIKISIQTATALAFLHASNTIHRDVKTNNILLDDNFSVKVADFGLSRLFPDDVTHVSTGPQGTPGYVDPDYQQCYQLTSKSDVYSFGVVLIELISSMPAVDMSRPRDEINLANLAVSKIQKSAFEELVDPCLGFESDREVRRMIASVAELAFQCLQRDKELRPSMDEVLEILKRIEIGNEKFDHLEEVNSNRAVGILHSGPIHTPSSPPSPDCVEYGLQKSMKSLPSPKAVTDKWHSESTTTHGSV 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1283 673 Gene3D Phosphorylase Kinase; domain 1 300 403 - -
Lele51g1283 673 MobiDBLite consensus disorder prediction 651 673 - -
Lele51g1283 673 Pfam Protein tyrosine and serine/threonine kinase 330 599 IPR001245 GO:0004672|GO:0006468
Lele51g1283 673 SMART serkin_6 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1283 673 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Lele51g1283 673 Gene3D Transferase(Phosphotransferase) domain 1 404 615 - -
Lele51g1283 673 SUPERFAMILY Protein kinase-like (PK-like) 310 601 IPR011009 -
Lele51g1283 673 FunFam Wall-associated receptor kinase-like 20 404 611 - -
Lele51g1283 673 ProSiteProfiles Protein kinase domain profile. 327 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1283 673 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 666 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1283 Lele-ChrLele51 8559019 8562327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1283 32 673 Receptor kinase-like Gene Family AT1G25390 46.605 3.64e-172 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele51g1283 PK_Tyr_Ser-Thr 5.2e-45 CL0016