Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1275 ATGAAGGCCGTGGTCTATGCTCTTTCACCTATCCAGCAGAAGTTTATGACTGGTCTCTGGAAGGATTTGCCTTCCAAGATTCACCACAAGATCTCTGAAAATTGGATCAGTGCCACACTCTTGGTCGGTCCACTTGTCGCTATTCGGTGTGGAGTAACTATTAAGAGCGTCCAGCTTCCCCCTCTCTTCTTCCCCGCTCTCCTTTTCTTCTCTTTCTCTCTCCTCCAAGGAGGCTTCACCACCGAGGAAAATCCTCCATTACCACCCATGGAGGCGCCTCCTGCTCCGCTCACTGCTCCGCCCCTCTCCGCCGTCGTCACTCCGCCGATGCCACCCTCTCACCTCAACTACCCTGACTCTGTTGATTCTTCTCCCCGTTCCCGCAACGCTGACTGTTGGGATGACCCTTTCCCTCCCGCTGCTGCCTCCTCCAAGCTCCGCCTCATGTGTAGCTATGGCGGTCACATCGTCCCTCGCCCTCACGACAAGTCTCTATGTTATGTTGGTGGCGATACTCGTATCGTAGTCGTTGACCGGAACACCTCTCTCTCCGACTTGTCTTCGCGACTTTCTAAAACCTTCCTTAATGGTTGTCCCTTCACTCTCAAATACCAGCTTCCCAGTGAAGACCTCGATTCCTTAATTTCTGTCACTACTGATGAAGATTTTGATAATATGATCGATGAGTATGATCGAACTGCTTCGAATTCGTCGGTTAAGCCTTCAAGAATCCGCCTCTTCTTGTTCCCGACGATGCCTGAATCGTCGCAATCGATTGAGCCTATACTTGATAATTCGGCTAAATCGGACGACTGGTTCCTGAACGCGCTAAACGGCACAGGAGTGCTCAACAGAGGGTTTTCTGAGTCCGGTTCGGTAAATTGCTTGCTGAGTCTCGATGATGACGCTGGTGGGAATAACCTGGACTCGGTGTCTAGGGAAAATGAAGTTGCTCAACAATCTGGATCTTTTGGGCATGGCAAGAATGTGACGAAGCAAGGACAGGATGTTCACTCTCTGGCTGATTCCCCTATGCTGGAAACGACTTCGTCTTTTGGGTCTACTTCTTCATCACCTTCGCTGGCGAATTTGCCGCCGATTCGGGTTCATGTGGTGGATGATAGTAGTGTTAGGATGCAGGATCAGAAAGCGGTCGGAATTGAGGATCAGTTTGCTCAAATGGGTGTTAGTGGTGGTGGTTGGCAGAGGCCAGATGAGGGGTTTTTTGTTCTGTCTCCTCCTCCTCCGATGCCGGCAACCATCACAACCCCGATGGTTGTGCCGATTAGCTCTGCTGTTGTTTCTGCCGGCGAATACCAGAATCGGGTTTTCTCCGACGATGAGAGATCAGACCACGGAGTCCCTGTGGGTTACAGAAAACCTGCGACACAGCAGCCACAACCACAGCCTCAGGCTCAGCCTCAGAATCTGCCTCCTCAATTTCAACAGAAGTCAGCCGGCGTTGTTGATTTGCCTTCCCCAGATTCAGCTTCAAGTGATGGTAGTCTTTCAAATCCATTGTCACGCCCAAAGCCTGTACTCTATCAAGAACAAGTTCAAATTCCCGCTGTGACGACAAGGGTTCCTAGTAATCCTGCTGATCCAGTAAAGCTTAATATGTCTGATCCTCACACTCGAATCCAGATACAGCAACAGGTGCAGGACCCTGGATATGTATTGCAACGACAATTTGATCCCCAGCAACAACCTCAACAGCAGCAGAAGCAGCAATATATGCCAAATTCCCATTTCATTCACCATGCTCCTGCTGGAGCCGTGCCAATCCCGGCATACTATCCTGTATATCCTTCCCAGCAACAATCTCATCCTCAGCATCACCCTCAGCTTGATCAGCAATACCCAGTTTACTACATGCCTGCAAGACAGGCCCAACCTTACAACTTATCGATGCAGCAGCAGCAGCAACCTAGTATCGGTGAAACCAACACAGCCATCCCTTCTAGCCGACCCCAAGCTCAGCCAAATCCGACCATGGCTCCATCATCTGCAGCTTACAATCCTGTAAGAAATGTTCCCATTCCAAAGGCTGAAATGGCTGCTGGCGCATACAGAACAAGTGCAGGCATCCCCCAATTAGTTCAAGTCCCTTCTACTCAGCCTCAGCATCAGCAACAATTTGTTGCTTACTCTCAGATTCATCATCCCTCTCAGACCGTTGCCACCAATTCTGCTGCCCCGGAAAATTATGCTTATGACTATGCTGATCCGGCTCATGCTCAGATATACTACACCCAACCTTTGGCTCCTACCATGCCTTCACAGTACCAAACCATGGCAGCTCCAGCTGTTGTGCTGCCAGAAGTTTCTTCTCAGCTTCCTTCTGATAGTATAAAGCAACAGATAAGAACCTCACAGCCAATATAA 2385 0.499 MKAVVYALSPIQQKFMTGLWKDLPSKIHHKISENWISATLLVGPLVAIRCGVTIKSVQLPPLFFPALLFFSFSLLQGGFTTEENPPLPPMEAPPAPLTAPPLSAVVTPPMPPSHLNYPDSVDSSPRSRNADCWDDPFPPAAASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVDRNTSLSDLSSRLSKTFLNGCPFTLKYQLPSEDLDSLISVTTDEDFDNMIDEYDRTASNSSVKPSRIRLFLFPTMPESSQSIEPILDNSAKSDDWFLNALNGTGVLNRGFSESGSVNCLLSLDDDAGGNNLDSVSRENEVAQQSGSFGHGKNVTKQGQDVHSLADSPMLETTSSFGSTSSSPSLANLPPIRVHVVDDSSVRMQDQKAVGIEDQFAQMGVSGGGWQRPDEGFFVLSPPPPMPATITTPMVVPISSAVVSAGEYQNRVFSDDERSDHGVPVGYRKPATQQPQPQPQAQPQNLPPQFQQKSAGVVDLPSPDSASSDGSLSNPLSRPKPVLYQEQVQIPAVTTRVPSNPADPVKLNMSDPHTRIQIQQQVQDPGYVLQRQFDPQQQPQQQQKQQYMPNSHFIHHAPAGAVPIPAYYPVYPSQQQSHPQHHPQLDQQYPVYYMPARQAQPYNLSMQQQQQPSIGETNTAIPSSRPQAQPNPTMAPSSAAYNPVRNVPIPKAEMAAGAYRTSAGIPQLVQVPSTQPQHQQQFVAYSQIHHPSQTVATNSAAPENYAYDYADPAHAQIYYTQPLAPTMPSQYQTMAAPAVVLPEVSSQLPSDSIKQQIRTSQPI 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1275 794 MobiDBLite consensus disorder prediction 443 509 - -
Lele51g1275 794 Pfam PB1 domain 161 250 IPR000270 GO:0005515
Lele51g1275 794 Gene3D - 165 249 - -
Lele51g1275 794 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 165 251 - -
Lele51g1275 794 MobiDBLite consensus disorder prediction 495 509 - -
Lele51g1275 794 ProSiteProfiles PB1 domain profile. 145 251 IPR000270 GO:0005515
Lele51g1275 794 SMART PB1_new 160 251 IPR000270 GO:0005515
Lele51g1275 794 MobiDBLite consensus disorder prediction 307 336 - -
Lele51g1275 794 MobiDBLite consensus disorder prediction 647 667 - -
Lele51g1275 794 PANTHER OS05G0427100 PROTEIN-RELATED 116 640 - -
Lele51g1275 794 SUPERFAMILY CAD & PB1 domains 161 258 - -
Lele51g1275 794 Pfam Cytochrome b-c1 complex subunit 8 1 48 IPR020101 GO:0005750|GO:0070469
Lele51g1275 794 MobiDBLite consensus disorder prediction 308 336 - -
Lele51g1275 794 CDD PB1_UP2 149 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1275 Lele-ChrLele51 8478868 8483693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1275 145 294 MAP Kinase Kinase Kinase AT3G46920 38.158 1.47e-25 111