Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1263 ATGTCACTCTCTCTCTTACCCTCTCTTCCTTCTTCTTCTTCCTCTTCCCTCCACCCCCATGCGCACTTTAGCCCTTCCCTTCCTTCCATGTCTACTCTATGCTGCCTAGCCCATCGCTTCCCTCGCCGCGTAAACCTCCGACGCGATCGCTTCGCTTCCGTCGCTGCCTCCGCAGTTAGGCAGGATACCACCGTCTGGACTCCTGCCCCACTCTCCGAGGTTGAACCTGCCGCCGAGTCCCTCTTTCACGTCACTGTCGATTTGTCCGACTCGCCTGATTTGGCCACATCTCACACCCGGGCCGGGCAGTACCTGCAGTTGCGAGTTCCTGACGCCTCCAAGCCTTCCTTCCTTGCCATCGCGTCGCCTCCGAAGCTCGCTTCGGCGAGTGGCGTGTTCGAGTTTCTTGTGAAGAGCGTGCCGGGATCTCCCGCTGAGATTCTATGTGGGTTGAAGAAAGGGACTGTGGTGGAACTGAGTCAGGTTATGGGGAATGGGTTCCATACGAGTCGGATAGATCCGCCTGAGAAATTTGCGACGGTTTATATTTTTGCGACTGGATCCGGAATCAGTCCAATTCGATCACTTATTGAGTCTGGATTTAGTGCTGCTGAGAGATCTGATGTGAGGCTTTATTACGGGGCTACAAACCTTCAAAGAATGGCTTATCAGGATAGATTCAAAGACTGGAAATCTTCTGGTGTTAAGATTGTGCCTGTCTTGTCTAAACCAGATGGTAGTTGGAATGGGGAAAGTGGCTATGTGCAGGCTGCTTTTACAAGAACCAATCAAATTACTAATCCTCTGTCAACCGGTGCTATACTTTGTGGGCAGAAACAGATGACTGAGGAAGTGACATCTATTCTTATTGCTGATGGAGTCTCAAGTGATAAGATATTGAAAAACTTCTGA 912 0.5077 MSLSLLPSLPSSSSSSLHPHAHFSPSLPSMSTLCCLAHRFPRRVNLRRDRFASVAASAVRQDTTVWTPAPLSEVEPAAESLFHVTVDLSDSPDLATSHTRAGQYLQLRVPDASKPSFLAIASPPKLASASGVFEFLVKSVPGSPAEILCGLKKGTVVELSQVMGNGFHTSRIDPPEKFATVYIFATGSGISPIRSLIESGFSAAERSDVRLYYGATNLQRMAYQDRFKDWKSSGVKIVPVLSKPDGSWNGESGYVQAAFTRTNQITNPLSTGAILCGQKQMTEEVTSILIADGVSSDKILKNF 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1263 303 Pfam Oxidoreductase NAD-binding domain 185 285 IPR001433 GO:0016491
Lele51g1263 303 Gene3D - 176 303 IPR039261 -
Lele51g1263 303 PRINTS Phenol hydroxylase reductase family signature 99 111 - -
Lele51g1263 303 PRINTS Phenol hydroxylase reductase family signature 182 201 - -
Lele51g1263 303 PRINTS Phenol hydroxylase reductase family signature 207 216 - -
Lele51g1263 303 MobiDBLite consensus disorder prediction 1 21 - -
Lele51g1263 303 CDD FNR_like 72 300 - -
Lele51g1263 303 PANTHER - 12 303 - -
Lele51g1263 303 SUPERFAMILY Riboflavin synthase domain-like 62 168 IPR017938 -
Lele51g1263 303 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 174 300 IPR039261 -
Lele51g1263 303 Gene3D Translation factors 59 164 - -
Lele51g1263 303 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 64 169 IPR017927 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1263 Lele-ChrLele51 8362267 8365716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1263 102 297 NADPH P450 reductases AT5G17770 24.171 1.46e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1263 51 8362267 8365716 Lele51g1263 51 8362267 8365716 ECH
Lele49g1245 49 8340671 8344388 Lele51g1263 51 8362267 8365716 hybridization
Lele50g1581 50 20977664 20981900 Lele51g1263 51 8362267 8365716 hybridization