Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1235 ATGGGGAATAACAAGCTTTGTGGAGGCATATCAAAGCTGGACCTCCCACCATGCCCAATCAAATCCAATGGACAAGGAAAACATCAAAACTTCAAGCTGATCATATCAATATGTTGTGGGATTGCTTTTCTCCTTCTAGCATCTATTGTTGCCATTTATCATGGCAATAATAGAAGCAAGAAGTCTTCTTCAAGTCCACCAACAATTGACATGATTTCTAGAGTATCGTATCAGAGTTTGCATAATGCTACAGCTGGATTCTCTCTCAACAACTTGATAGGATCTGGCAGTTTCAGCTCTGTATATAAGGGAAGTCTCGAGTCCAATGAAGATGTTGCGATAAAGGTCGTCAACCTTGAAATGAAGGGAGCTAACAAGAGTTTTGTTGCGGAATGTAATGCACTTAAAAATACAAGGCATCGAAATTTGGTAAAAATTATATCATGTTGTTCTAGCATAGATTACAAGGGCCATGAATTCAAAGCTTTAATTTATGAGTACATGGTGAATGGAAGCTTGGAAAGTTTGTTGCACCCCAATACAGAAAATCCAAATTATCCAAGAGTTTTGCTCCTTGATCAAATAGTAAATATTCTTATTGATGTTGCATCCGCATTATGTTATCTTCACCATGAATGTGAGCCACCGCTTGTTCATTGCGATTTGAAGCCAAGCAATGTTCTTCTTGATAGCAACATGGTTGCTTATTTGAGTGATTTTGGATTAGCAAGACTACTTTCAACTGTTGAAGTCATATCTAACGAACGAAGTAGCACAATTGGAGTAAAGGGTACTATTGGCTATGTTCCACCAGAATATGGAATGGGTTCTGCTGTGTCAATACAAGGTGACATGTATAGTTTTGGTATTCTTATCTTAGAGATGTTAACAAAGAGAAGGCCTACAGAAGACATGTTTAACGATGGTTACAATCTTCATAAATATGTGGAAACTTCTTTTCCAAACAATTTTTTGCATGTTGCGAGCCCAACTATTCTTCCTATGCAATCAGAACATGTGGGAGCATCAAGAGACATACAGGAGAACATGGAAAGGATGGATCCAAACGTGGAGAAATGCATATTTAGTTTGTTTAGGATTGGACTTGCTTGCTCTATGGAATCACCACATGAAAGAATGAGTGCAGCAGATGTTATCAAGGAGCTTTTCTCTGTCAAAAGGTAA 1185 0.3797 MGNNKLCGGISKLDLPPCPIKSNGQGKHQNFKLIISICCGIAFLLLASIVAIYHGNNRSKKSSSSPPTIDMISRVSYQSLHNATAGFSLNNLIGSGSFSSVYKGSLESNEDVAIKVVNLEMKGANKSFVAECNALKNTRHRNLVKIISCCSSIDYKGHEFKALIYEYMVNGSLESLLHPNTENPNYPRVLLLDQIVNILIDVASALCYLHHECEPPLVHCDLKPSNVLLDSNMVAYLSDFGLARLLSTVEVISNERSSTIGVKGTIGYVPPEYGMGSAVSIQGDMYSFGILILEMLTKRRPTEDMFNDGYNLHKYVETSFPNNFLHVASPTILPMQSEHVGASRDIQENMERMDPNVEKCIFSLFRIGLACSMESPHERMSAADVIKELFSVKR 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1235 394 PANTHER OS04G0122200 PROTEIN 1 383 - -
Lele51g1235 394 Gene3D Phosphorylase Kinase; domain 1 69 167 - -
Lele51g1235 394 Pfam Protein kinase domain 89 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1235 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Lele51g1235 394 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Lele51g1235 394 ProSiteProfiles Protein kinase domain profile. 87 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1235 394 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 168 394 - -
Lele51g1235 394 SUPERFAMILY Protein kinase-like (PK-like) 59 390 IPR011009 -
Lele51g1235 394 SMART serkin_6 87 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1235 394 FunFam LRR receptor-like serine/threonine-protein kinase EFR 58 167 - -
Lele51g1235 394 Gene3D Transferase(Phosphotransferase) domain 1 168 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1235 Lele-ChrLele51 8176409 8178210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1235 1 393 Receptor kinase-like Gene Family AT3G47570 45.455 7.49e-107 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele51g1235 Pkinase 1.1e-39 CL0016