Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1230 ATGGAGACTGGTAAGGCAGGTTCATCGTCGTCGTCTTACTATACCATTCTTGGTGTTAGTTCAGATTCTACCTCTACAGAAATAAGGAGAGCTTATCGCAAGCTTGCTTTGCAATGGCATCCAGATAGGTGTACTAGAACGCCTTCTTTGTTGAGTGAAGCTAAACAGAAATTTCAGCAAATTCAAGAAGCTTATTCAGTTCTATCAGACCACAAGAAAAGAACAGTGTACGATGCAGGGTTGTATGATCCTGAAGATGAAGAAGATGAGGGATTTTCTGAGTTTATGGAAGAGATGGTGTCTCTGATGACTCAAGTGAGGAAGGAGGAAAAGGATTATTACAGCATGGAGGAGTTACAGAGCATGTTTACTGAGATGGCTCATGATTTTGATCAGTCATCTTCATGGCGTTGCGGGCCCTCCATTGTTGATGATGATGAGTACCCTCACTTCTCAAAGAAGATCCGTTCGGACGAACATGGCAGAACCTGA 492 0.4289 METGKAGSSSSSYYTILGVSSDSTSTEIRRAYRKLALQWHPDRCTRTPSLLSEAKQKFQQIQEAYSVLSDHKKRTVYDAGLYDPEDEEDEGFSEFMEEMVSLMTQVRKEEKDYYSMEELQSMFTEMAHDFDQSSSWRCGPSIVDDDEYPHFSKKIRSDEHGRT 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1230 163 MobiDBLite consensus disorder prediction 143 163 - -
Lele51g1230 163 PANTHER PUTATIVE, EXPRESSED-RELATED 6 135 - -
Lele51g1230 163 CDD DnaJ 13 70 IPR001623 -
Lele51g1230 163 Pfam DnaJ domain 13 78 IPR001623 -
Lele51g1230 163 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Lele51g1230 163 MobiDBLite consensus disorder prediction 141 163 - -
Lele51g1230 163 PRINTS DnaJ domain signature 32 47 IPR001623 -
Lele51g1230 163 PRINTS DnaJ domain signature 153 163 IPR001623 -
Lele51g1230 163 PRINTS DnaJ domain signature 14 32 IPR001623 -
Lele51g1230 163 PRINTS DnaJ domain signature 53 73 IPR001623 -
Lele51g1230 163 SMART dnaj_3 11 73 IPR001623 -
Lele51g1230 163 Gene3D DnaJ domain 9 135 IPR036869 -
Lele51g1230 163 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Lele51g1230 163 SUPERFAMILY Chaperone J-domain 10 84 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1230 Lele-ChrLele51 8114606 8115721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1230 8 79 C2H2 Transcription Factor Family AT1G74250 45.205 4.56e-14 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1230 51 8114606 8115721 Lele51g1230 51 8114606 8115721 ECH
Lele49g1210 49 8062458 8063580 Lele51g1230 51 8114606 8115721 hybridization
Lele50g1631 50 21393706 21394788 Lele51g1230 51 8114606 8115721 hybridization