Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1222 ATGGCTCAGAGGCATTCTATTCTACACTTCTCAAAAATGGAGTCAACTGCAAGATCCAACTCTTTCACAGTCATCTTCTTCTTCTTCTTCTTCCTCTTCCTCCTCAACGTCTCTGCTTCTTCAAATCCAACCTCTTCCTTCCCAAAACAAGCCATGCCCACAAAATCTGGATACCTCCCTGTTAATCGCACCTCCAAATCCGCCATTTTCTACGCTTTCTATGAAGCTCAGAACCTCCCTTCACCTATCTCCCAAACCCCACTTCTCATCTGGCTCCAAGGCGGCCCTGGTTGTTCCTCCATGATCGGCAACTTCTACGAGCTCGGTCCATGGCGCGTCACCAAATCCCTTAATCTCGTCCCCAATCCTGGCTCTTGGAACAGAATCTTCGGCGTCCTTTTCCTCGATAACCCCATCGGAACAGGATTCAGTATCGCCTCAAATCCTGAGGAAATCCCCAGAAACCAGAAATCTGTAGCCAAACACCTCTTCGCTGCTATAGCCAAGTTCATTAAACTCGACCCTGCTTTCAAGTATCGCCCGATTTATATAACCGGCGAAAGCTATGCCGGGAAATACGTTCCAGCGATTGGTTATTACATATTACAAAGGAATTCACGTTTGAATGCTTCCCAGAGTATGAATTTGGCAGGTGTAGCAATTGGGGATGGGTTAATACACCCTATAGTACAAGTTGCTACTCATGCTTTGAATGCTTATTATATTGGTTTGATCAATGAGAGGCAGAAGATTGAGTTAGAGAAAGCTCAATTGGAAGCAATCAGATTGACCAAATTGGGGAATTGGAGTGCAGCAGTAGATGCTAGAATCGATGCTTTGAGAATGTTGCAGAACATGACTGGTTTAGCTACTTTGTATGACTACACAAGAAAAGCTCCATATGAAGATTATTTGGTCGATGAGTTCTTGAAATCCAGCGATGTGAAGAAGGCATTAGGGGTGAATGAGTCTCATGTTTTTGAAGGATGTAGTCATGCTGTAGGAATTGCAATGAAAGAAGATATTATGAAGAGTGTGAAGTACATGGTGGAATACCTGGTGACAAAAACCAGAGTGCTTTTGTATCAAGGCCAGCATGACCTGAAAGATGGTGTGGTTCAAGTAGAAGCATGGGTGAAGAGAATGAAATGGGAAGGGATTGAGAAGTATTTGAATGCAGATAGGAAGATATGGAAAGTGAATGGTGAGAATGCTGGGTATGTTCAAAAATGGCAGAGCCTTACTAATGTTGTTGTATTAGGATCTGGCCATCTTTTGCCTGCTGATCAATCTGTGATTTCTCAAGCCATGATTGAGAACTGGGTTTTGCAGAAGGATTTGTTTGAGAAGGATGATCAACAGGAGAATGTGTCACTAAGTTTGTGA 1386 0.4329 MAQRHSILHFSKMESTARSNSFTVIFFFFFFLFLLNVSASSNPTSSFPKQAMPTKSGYLPVNRTSKSAIFYAFYEAQNLPSPISQTPLLIWLQGGPGCSSMIGNFYELGPWRVTKSLNLVPNPGSWNRIFGVLFLDNPIGTGFSIASNPEEIPRNQKSVAKHLFAAIAKFIKLDPAFKYRPIYITGESYAGKYVPAIGYYILQRNSRLNASQSMNLAGVAIGDGLIHPIVQVATHALNAYYIGLINERQKIELEKAQLEAIRLTKLGNWSAAVDARIDALRMLQNMTGLATLYDYTRKAPYEDYLVDEFLKSSDVKKALGVNESHVFEGCSHAVGIAMKEDIMKSVKYMVEYLVTKTRVLLYQGQHDLKDGVVQVEAWVKRMKWEGIEKYLNADRKIWKVNGENAGYVQKWQSLTNVVVLGSGHLLPADQSVISQAMIENWVLQKDLFEKDDQQENVSLSL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1222 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Lele51g1222 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Lele51g1222 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Lele51g1222 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 414 427 IPR001563 GO:0004185|GO:0006508
Lele51g1222 461 SUPERFAMILY alpha/beta-Hydrolases 53 445 IPR029058 -
Lele51g1222 461 Pfam Serine carboxypeptidase 50 443 IPR001563 GO:0004185|GO:0006508
Lele51g1222 461 Gene3D alpha/beta hydrolase 36 459 IPR029058 -
Lele51g1222 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 54 430 IPR001563 GO:0004185|GO:0006508
Lele51g1222 461 ProSitePatterns Serine carboxypeptidases, serine active site. 184 191 IPR018202 GO:0004185
Lele51g1222 461 Coils Coil 246 266 - -
Lele51g1222 461 FunFam Carboxypeptidase 38 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1222 Lele-ChrLele51 8040946 8042331 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1222 315 438 Calmodulin-binding Proteins AT2G22960 25.000 1.17e-08 53.1