Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1217 ATGTATCTTAGACCTCCTTCAGCTAGTGAAGAAGCAACGATTAATGATTGGATCAAGGTGCGGCAATCTGGAATTAGATATTATCTTTCTCTTGGTGACCAGAGGATTGTTGACAAAAATTTCATTATCAGACCAAAGGCTGAGTTTGAGGTTGGGCGAATGACATTAGGGGGGTTGCTTGCTCTGGGTTACTCTGTTGTTGTTAGCTATAAACGTGCATCTACAATAGTCAGTAATGGGAATGTTTCTGTGTCTTTTGAAACCATTGATGCTCTGGGCGAGACATACATGGTGCTGAGGGGAACAAATAGGAAAACAGTTGGAACAGAAGCATTAAAGATGGGTGTAAGTGGCCCTTGGATCACTAAATCATACCTGGAAATGATTCTTGAGAGAAAAGGTGTACCTCGTCTCAGTACACCACCACTTGTGTCTAATCCGCCTATGTCTGGTAATCCAGAAAGAGAAATTGTTGCACCAAAGCCAATCCGAGTTACCCCTGACCTTGTAACTGGAATTGAGGATTTATCTCAGCCATGGACTCGATCTCCAAGAAAGTCCAAAATGGACCCTGTCATAGCAACTTGGCGTTTTATATCTTCAGATTCATCTCGGACAGACAACACAGTACTAGATCCTTCATCTTTCAGGGATACTATGAGGCTTGCTGCAATGCCTGATTCCTATGACCTGGATAGGGGATTGCTTTTGGCCGTTCAAGCAATACAGGCTTTGTTGGAGAAGAAAGGAGTTCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGATCTGGAAAGACTAGTTTGGCCCATAAAATGGCAAATATCATTGGTTGTGAGGTAGTTTCTCTGGAAAGCTATTATAAACGTGTAAAGGATTTTAAATATGATAACTTCAGCTCACTTGATCTGGCTTTGCTATCAAAGAATATTGATGACATACGAAATGTTCGGAGAACAAAAGTTCCTATATTCGACCTGGAAAGTGGTGCTCAGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGGGTTTATGCTTTGCATCCTGATATCCGAAAATCTCTTGACTTGTGGATTGCTGTTGTAGGAGGTGTTCATTCACATTTGATATCTCGAGTTCAAAGGGATAAGAGTAGAGTGGGATGTTTTATGTCCCAAAATGAGATTATGATGACAGTATTTCCTATGTTCCAGCTGCACATTGAACCACATCTTGTCCACGCACATCTTAAGATAAGAAACGACTTTGACCCTGTTCTTTCCCCTGAGAGTTCATTGTTTGTATTGAAGAGTAACAAAAAGGTAGCTTATCAAGATATTCTTACGATTCTTGATCCAGCAAAATTTTGCAGTTCTGTTCAAAAGTTCATCGATATATATTTAAAGCTTCCTGGGATCCCCTCTAACGGACAATTGACAGAGGGTGATTGTATAAGAGTCAGAATATGTGAAGGGAAATTTGCTTTATTGATACGTGAGCCTATTAGAGAAGGAAACGTCATCATCCAGCCGAAAGTGGATTTTGATATTGGCATTAGTACAGTTGCAGGTCTTCTCAATCTTGGGTATCAGGCAGTAGCATATATTGAAGCATCTGCGTTCATTTACCAAGATGGAAAGATTCTGATTGAGGTTGACCATCTACAAGATGTCTCCGGTCCATACATTCAGATTAAGGGTGTTGATAAGGATGCTGTGGCAGCAGCTGGTTCAATGCTTAAATTGGATGGTTCATATACTACTAAAAGTTATCTTCAAATAATTTTGGAAAACCTACCTGCACTGGAAAGAACTTTTGGTGGTATCCACTCTCAACAATCTGCGAGGATGCAAGAAATTGTTGAGTTTATTCAATCTCAGGGTAGCAGCTTAGCATCAGAATGCTCACCAAGCAGAGTGGCGTCACCAATTGAAGGGATTATAGAGGAGATGCAATCCAGGATTAGAAGGCTAGAACGGTGGCTTACTGTAAATACGGTTTTATGGACATTTCTGATGTCTGCTCTGGTGGGTTATTCACTATACCAAAGGAAGCGTCAATGA 2064 0.4075 MYLRPPSASEEATINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYSVVVSYKRASTIVSNGNVSVSFETIDALGETYMVLRGTNRKTVGTEALKMGVSGPWITKSYLEMILERKGVPRLSTPPLVSNPPMSGNPEREIVAPKPIRVTPDLVTGIEDLSQPWTRSPRKSKMDPVIATWRFISSDSSRTDNTVLDPSSFRDTMRLAAMPDSYDLDRGLLLAVQAIQALLEKKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKRVKDFKYDNFSSLDLALLSKNIDDIRNVRRTKVPIFDLESGAQSGFKELEVSEDCGVIIFEGVYALHPDIRKSLDLWIAVVGGVHSHLISRVQRDKSRVGCFMSQNEIMMTVFPMFQLHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILTILDPAKFCSSVQKFIDIYLKLPGIPSNGQLTEGDCIRVRICEGKFALLIREPIREGNVIIQPKVDFDIGISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVSGPYIQIKGVDKDAVAAAGSMLKLDGSYTTKSYLQIILENLPALERTFGGIHSQQSARMQEIVEFIQSQGSSLASECSPSRVASPIEGIIEEMQSRIRRLERWLTVNTVLWTFLMSALVGYSLYQRKRQ 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1217 687 Gene3D - 251 428 IPR027417 -
Lele51g1217 687 Gene3D - 438 599 - -
Lele51g1217 687 PRINTS Uridine kinase signature 252 269 - -
Lele51g1217 687 PRINTS Uridine kinase signature 279 290 - -
Lele51g1217 687 PRINTS Uridine kinase signature 373 383 - -
Lele51g1217 687 Pfam Phosphoribulokinase / Uridine kinase family 254 419 IPR006083 GO:0005524|GO:0016301
Lele51g1217 687 CDD UMPK_like 254 422 - -
Lele51g1217 687 PANTHER URIDINE KINASE 231 616 - -
Lele51g1217 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 240 422 IPR027417 -
Lele51g1217 687 SMART AAA_5 251 395 IPR003593 -
Lele51g1217 687 SUPERFAMILY CYTH-like phosphatases 460 594 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1217 Lele-ChrLele51 8006976 8017303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1217 247 388 PRT Gene Family AT1G55810 25.974 5.67e-09 57.0