Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1213 ATGTCTGGTTCACTCAGTGCCTTCAAGCTTCACTCTAATTACACTCCAAATCCCACCATTAATATTTCTCCATCATCATCAGCTCCAGAAATCACTCCAAATCTTCATTGTATTTGTGCCCACTGCACCAATCTTTTCTCCTTCAATATTCACCATCGTCTGGGAGAGGAAGAAGAAGGTGTTACTATTACGAGCAGCTCAAGGTGGAATCCAACACCTGCACAACTTTTATACCTCGAGCAACTTTACAGACAGGGAACGAAGACCCCAACGGCTCAACAAATACAGTTAATTGCTTCGCAGCTACGTCGTTTTGGCAATATACAAGCCAAGAATGTCTTCTACTGGTTCCAGAACCACAAAGCAAGAGACCGCCAGAAACGTCGCCGTTCCGACATGGAAATCTCTCCTCCTCCTCCTTCTGCTCTGCCACACGCTCGTCAAGGATTGAGAGGGACAGGTTATGAAGTTACAGAGACAAACAAGTGGGCATCTTCTTCAAACTGCAGTGCAGTTGCTGAGGTTTCTGATTCACTGAATAGAGCAGAAAGAGGAGATTATAGGAGGACTCAAAGGGAGGAAAGTGAAACACAAATTTTGAGAATCAAGAGAGAGGAAAGCCTACAAGAAAAGTGCCAAATTAGAGATCATATGTCTTCTTTCTTTCTTTCAAATTCCAAGCATCTCAACATCAAAAGCATTACAACTTCAGACCCTACAAATTATTACTGTTATGAAGAAGAAGAAGAAGAAGAAGTTGCAGATGACAGAACCCTTAAGCTGTTTCCTCTTAAGAGATCAGATGAAGATGATGAAAGCAGCAAAAATAAAGATAAATTCTGTTCCTTCAATAATGCTTCCATGGACTCTGATGAAATCACTTCCAATCAGTTTTTTGAGTTCCTTCCTTTAAGAAACTGA 921 0.4126 MSGSLSAFKLHSNYTPNPTINISPSSSAPEITPNLHCICAHCTNLFSFNIHHRLGEEEEGVTITSSSRWNPTPAQLLYLEQLYRQGTKTPTAQQIQLIASQLRRFGNIQAKNVFYWFQNHKARDRQKRRRSDMEISPPPPSALPHARQGLRGTGYEVTETNKWASSSNCSAVAEVSDSLNRAERGDYRRTQREESETQILRIKREESLQEKCQIRDHMSSFFLSNSKHLNIKSITTSDPTNYYCYEEEEEEEVADDRTLKLFPLKRSDEDDESSKNKDKFCSFNNASMDSDEITSNQFFEFLPLRN 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1213 306 CDD homeodomain 68 128 IPR001356 GO:0003677
Lele51g1213 306 Gene3D - 66 133 - -
Lele51g1213 306 SMART HOX_1 64 131 IPR001356 GO:0003677
Lele51g1213 306 ProSiteProfiles 'Homeobox' domain profile. 62 127 IPR001356 GO:0003677
Lele51g1213 306 MobiDBLite consensus disorder prediction 124 148 - -
Lele51g1213 306 Pfam Homeodomain 66 126 IPR001356 GO:0003677
Lele51g1213 306 SUPERFAMILY Homeodomain-like 66 130 IPR009057 -
Lele51g1213 306 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 56 301 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1213 Lele-ChrLele51 7977778 7979657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1213 54 174 Wox Gene Family AT3G18010 48.413 3.12e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele51g1213 Homeodomain 2.1e-17 CL0123