Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1199 ATGACAACCCAATCCCCTCATTTCCTCTCTTCTCTCTTACTCCTCACTGTCACAATATTCAATCTCCACACAACCGCCGTCGCAGTCCGCTCCACCACTGCCAATTCCGATGCCGCCGCTTTTATCCGTACATGCTGTCGTACATGCCTCTACCCTGACCTCTGCGTCTCCTCTCTCTCTTCCTTTACGAATAATATCCAAAATAACCATGCCATGCTCGCTCGCGCCGCCATAACTGTTAGCCTCACCAGGGCTCAGAGCATGTCCTCCTACGTCTCCAACCTCCTCCGTCAAGCCAACGCGGACCCCAGCACCACCTCTGCCCTCCGTGACTGCTCTTACGGCCTCGGGGTCGCCGTTGATAACATCCGCGGCTCACTCAAGCAGATGCAACAGATGATTGATAACAGCGCGGTTGATGGAGAGAAATTCAGGTTCCAGATGAGCAGCGTTCAGACGTGGATGAGCACGGCGATGACGGAGGAGCAGGCGTGCAGCCAGCGGTTCGATGCTGTGTCGGACGGTAGGGTGAAGGCCGATGTGGTTCGTCAAGTGACGGCGGTGAAGAAGTTTATCAGTAATGCGCTTGCACTGGTGCATAGTTACGGGGAGAACGTGAGAAAACCCTAA 630 0.5476 MTTQSPHFLSSLLLLTVTIFNLHTTAVAVRSTTANSDAAAFIRTCCRTCLYPDLCVSSLSSFTNNIQNNHAMLARAAITVSLTRAQSMSSYVSNLLRQANADPSTTSALRDCSYGLGVAVDNIRGSLKQMQQMIDNSAVDGEKFRFQMSSVQTWMSTAMTEEQACSQRFDAVSDGRVKADVVRQVTAVKKFISNALALVHSYGENVRKP 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1199 209 Pfam Plant invertase/pectin methylesterase inhibitor 41 198 IPR006501 GO:0004857
Lele51g1199 209 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 201 IPR035513 -
Lele51g1199 209 CDD PMEI-like_3 44 202 - -
Lele51g1199 209 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 202 IPR035513 -
Lele51g1199 209 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 201 IPR006501 GO:0004857
Lele51g1199 209 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 198 - -
Lele51g1199 209 SMART PMEI_2 37 198 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1199 Lele-ChrLele51 7891063 7891692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1199 8 198 Carbohydrate Esterase AT5G53370 26.768 2.47e-11 60.5