Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1178 ATGTCGATCTCCAATCTCTTGCCTCTGTTTCTCCTCCTTGCTGTGTTCTCAACCTTCCCATCCCCATCATCCTCCGCCACATATTCTTTCATCTTCGGCGGCTGCTCGCAGTTGAAGTTCTTGTCCGGGACGGCGTATGAGAGCAACGTGAACTCCGTTCTAACATCTCTTGTGAACTCGGCCATGTTCTCCAACTACAACAACTTCACCGTCCAAGGCTCCACCCAGCAGGACACCGTCTCCGGTCTCTTCCAGTGCCGTGGCAACCTCGGCAGCACGGACTGCTCTCTCTGTGTTGCCCGGGCCATCAGCCAACTTGGCACCCTCTGCCTCAACGCTTGCGGCGGCGCGTTGCAGCTGGACGGCTGCTTCGTTAAGTATGATAACGCAACGTTCCTGGGGGTGGAGGACAGGACTGAGGTGCTGAAGAAATGTGGACCGTCGATTGGATTGACTTCTGATTCGTTGACTCGGGGAGATGCTGTGTTGGCGAGTTTGGAAGCGTTAGATGGGCCCTTCAGGATTGCAAGTTCTGGAGATGTACAGGGTGTTGCGCAGTGCGTGGGGGATTTAAGTGCGAGCCAGTGTCAGGATTGCCTCTCCGATGCGATCCAACGGCTGAGAATGGAGTGTTCGGGCGGCGCGTGGGGAGAGATGTACTTGGCCAAATGCTACGCGCGATACTCTGGACGTGGGAATCGCTCGCCAAGTGGAAATTGTATGTTACAAATTCGCACTATAGATTATTATTAA 753 0.5432 MSISNLLPLFLLLAVFSTFPSPSSSATYSFIFGGCSQLKFLSGTAYESNVNSVLTSLVNSAMFSNYNNFTVQGSTQQDTVSGLFQCRGNLGSTDCSLCVARAISQLGTLCLNACGGALQLDGCFVKYDNATFLGVEDRTEVLKKCGPSIGLTSDSLTRGDAVLASLEALDGPFRIASSGDVQGVAQCVGDLSASQCQDCLSDAIQRLRMECSGGAWGEMYLAKCYARYSGRGNRSPSGNCMLQIRTIDYY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1178 250 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 4 233 - -
Lele51g1178 250 FunFam cysteine-rich repeat secretory protein 3 27 132 - -
Lele51g1178 250 ProSiteProfiles Gnk2-homologous domain profile. 28 132 IPR002902 -
Lele51g1178 250 ProSiteProfiles Gnk2-homologous domain profile. 133 233 IPR002902 -
Lele51g1178 250 Pfam Salt stress response/antifungal 39 129 IPR002902 -
Lele51g1178 250 Pfam Salt stress response/antifungal 177 229 IPR002902 -
Lele51g1178 250 Gene3D - 27 132 IPR038408 -
Lele51g1178 250 Gene3D - 158 231 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1178 Lele-ChrLele51 7769722 7770474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1178 27 229 Pollen Coat Proteome AT4G20670 25.561 5.06e-13 65.1