Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1175 ATGCAGCAATCTGCAGCAGATTATAAACGTCTACATCATCTTCCTCCTTCTCCTCCAGATTTCTTCTCTCAGTATTTCCCTATGGGCTTGAAGGTCCTCTTAGTTGGCACCGATAATGTCACCCAAAATAGTATTCAAAGACATCTTCCACCTCCTCGTTATCACATAACTTACTGTCACTCTGGTACTTCTGCCTTACAACACTTACAAAACAAAGATGTTTCCTTTGACTTGATTCTTAGTGATGTCTTCTTGGAAGACATGGATGGCTACCAATTCATCAGTCACCAACGAGCGAAAACAAATATTCCTCACGTTGCGATAAGTGGGCTTGAAAGAGCAAGTAGCATAAGGACAGCATACAAAAGCGGTGTGTGTTATGTTTTGTGGAAGCCAGTGAATGATAGTGAGCTGAGGAATTTATGGCAACATGTTTGTAAGAGAAGGGAACAAGATGATCATCAGCCTGAGATTGACTTCTTCAACGGTGACGCTGACGACAATAATCATAATTATCAGCAGAATCGATTATTAATACGACAGCAGCATCCTCATCAGGATGAGGGTTGTTCTTCTTCTCTTGTCGTTTCCAGAGACAACAGTCCGAAGGTAGAAAACGGCAGTGAGTTTGTGAATAATAGTAATCATGGAGATCAAAGTGCTTTGAAAAAACGACGGATCGTTTGGACACAGGAGCTCCATCAGAATTTTCTTAATGCCGTCAACATTCTTGGCGGCGTAGAAAAGGCGGTGCCAAAAGCGGTTCTTGATAAAATGGTGGATGTGCCTTTTCTGTCGAGGGAAAATGTTGCAAGTCACTTACAGAAATACAGAATGTACTTAAAGAGAATGGAGGAAGATTGGCTGAGTGAAAATCATAATCATATGAATGCGATGCCTGTGAACCAAATGCCTCCATGTAATGGCCCTGACTATGGAAGATTGATTGCCAATAATAATATTTCTGCTCAACCAGTAACAACAGTTCGTTTTCAACCTGATGACGTGTGGGTTTTTCAAAACCCTAGTAATAATCATCATCATCATCCCCACCTTCTAGAACCTTCCAGGAATAATCCTCCTCCTCCTCCTTCTCATCATCTCACAGATGAAGGAACTTCCCTCTGGTCCCTAGCCCATCAAGGTCATCCTCATGTGGTTCCAATAGCAATGGTACCTCCTGCACCTTATGCAGGAAATGTAAGCAATATGCAGCAGCAACAGATAGCTCAAAACTTGATCACTTCTGGTATGCAGCAACTAGATCAAAACCTATCTTCAGGTTCTTGCCATGGAAACAATATGAAGCAGACTAATCAAAACCTAGCTTCAAGTTCTTGCCATGGAGGCATTATGGAGCATTTTGATCAAAACCTAGCTTCTGGTTCTTGCCATGGAGGCAATATGGAGCATTTTGATCATAACCTAGGTTCAGGTACTTCCTATGGAAGCAATATGCAGATAACTCAAAACCTGAATTTTGCTATGCAGCATCAAGGGTCAAGTCAAAACCTAGCTTCAAGTTCTTGCCATGGAAACAATATGAACCAGCTTGATCAAAACCTAGCTTCTGGTTCTTGCCATGGAGGCAATATGAAGCATTTTGATCAAAACCTAGCTTCAGGTACTTCCCATGGAAGCAATATGCAGATGAATCAAAACCTGACTTCTGCTATGCAGCATCAAGGGTCAAATCAAAACCTAGCTTCAAGTTCTTGCCATGGAAACAGTATGAACCAGCTTGATCAAAACCTAGCTTCTGGCTCTTGCCATGGAGGCAATATGGAGCATTTTGATCAAAACCTATCTTCAGGTACTTCCTATGGAAGCAATATGCAGATGAATCAAAACCTGACTTCTGCTATGCAGCATCAAGGGTCAAGTCAAAACCTAGCTTCAAGTTCTTGCCATGGAAACAATATGAACCAGCTTGATCAAAACCTAGCTTCTGGTTCTTGCCATGGAGGCAATATGAAGCATTTTGATCAAAACCTACCTTCAAGTACTTCCTATGGAAGCAATATGCAGATGACTCAAAACCTGACTTTTGCTATGCAGCATCAATGGTCAAGTCAAAACCCAGCTTCAAGTTCTTGCCATGGAAACAATATGAACCAGCTTGATCAAAACCTAGCCTCTGGTTCTTGCCATGGAGGCAATATGGAGCATTTTGATCAAAACCTAGTTTCAGGTGCTTCCTATGGAAGCAATATGCAGATGAATCAAAACCTAACTTCTGCTATGCAGCATCAAGGGTCAAGTCAAAACCTAGCTTCAAGTTCTTGCCATGGAAACAATATGAACCAGCTTGATCAAAACCTAGCTTCTGGTTCTTGCCATGGAGGCAATATGGAGCACTTTGATCAAAACCTAGCTTCAGGTACTTCCTATGGAAGCAATACGCAGATGACTCAAAACCTGACTTCTGCTATGCAGCATCAAGGGTCAAGTCAAAACCTAGCTTCAGGTTCTTGCCATGGAGGCAATCTGCATATAACTCAAAACCCGACTTCTGGTGTGCAGAATCTAGATGTAGCTTCAGGTTCTTTACATGAAGGCAATATGCAACATCAGCAAGATCAAAACCTAGCTTCAGGTTCTTGTTATGTTACTACTACTAGAGGTGGTAATGGTGATGGAATCGTCAAGACAGAAGCAACACCTGTAATTAGGGATCATGATGGGGAAGTGTGTGATAATTATGATGACTACTTTGACGAGACAAATCTTAACCTCATTATGGCTGATCCTGATCATACCCAATACACGGTTTAA 2775 0.4169 MQQSAADYKRLHHLPPSPPDFFSQYFPMGLKVLLVGTDNVTQNSIQRHLPPPRYHITYCHSGTSALQHLQNKDVSFDLILSDVFLEDMDGYQFISHQRAKTNIPHVAISGLERASSIRTAYKSGVCYVLWKPVNDSELRNLWQHVCKRREQDDHQPEIDFFNGDADDNNHNYQQNRLLIRQQHPHQDEGCSSSLVVSRDNSPKVENGSEFVNNSNHGDQSALKKRRIVWTQELHQNFLNAVNILGGVEKAVPKAVLDKMVDVPFLSRENVASHLQKYRMYLKRMEEDWLSENHNHMNAMPVNQMPPCNGPDYGRLIANNNISAQPVTTVRFQPDDVWVFQNPSNNHHHHPHLLEPSRNNPPPPPSHHLTDEGTSLWSLAHQGHPHVVPIAMVPPAPYAGNVSNMQQQQIAQNLITSGMQQLDQNLSSGSCHGNNMKQTNQNLASSSCHGGIMEHFDQNLASGSCHGGNMEHFDHNLGSGTSYGSNMQITQNLNFAMQHQGSSQNLASSSCHGNNMNQLDQNLASGSCHGGNMKHFDQNLASGTSHGSNMQMNQNLTSAMQHQGSNQNLASSSCHGNSMNQLDQNLASGSCHGGNMEHFDQNLSSGTSYGSNMQMNQNLTSAMQHQGSSQNLASSSCHGNNMNQLDQNLASGSCHGGNMKHFDQNLPSSTSYGSNMQMTQNLTFAMQHQWSSQNPASSSCHGNNMNQLDQNLASGSCHGGNMEHFDQNLVSGASYGSNMQMNQNLTSAMQHQGSSQNLASSSCHGNNMNQLDQNLASGSCHGGNMEHFDQNLASGTSYGSNTQMTQNLTSAMQHQGSSQNLASGSCHGGNLHITQNPTSGVQNLDVASGSLHEGNMQHQQDQNLASGSCYVTTTRGGNGDGIVKTEATPVIRDHDGEVCDNYDDYFDETNLNLIMADPDHTQYTV 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1175 924 FunFam Two-component response regulator 220 285 - -
Lele51g1175 924 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 197 509 IPR044841 GO:0003700|GO:0006355
Lele51g1175 924 SUPERFAMILY Homeodomain-like 222 283 IPR009057 -
Lele51g1175 924 SMART REC_2 30 142 IPR001789 GO:0000160
Lele51g1175 924 Gene3D - 221 285 - -
Lele51g1175 924 Pfam Response regulator receiver domain 32 140 IPR001789 GO:0000160
Lele51g1175 924 SUPERFAMILY CheY-like 29 153 IPR011006 -
Lele51g1175 924 MobiDBLite consensus disorder prediction 340 371 - -
Lele51g1175 924 Gene3D - 30 160 - -
Lele51g1175 924 MobiDBLite consensus disorder prediction 186 217 - -
Lele51g1175 924 ProSiteProfiles Response regulatory domain profile. 31 146 IPR001789 GO:0000160
Lele51g1175 924 MobiDBLite consensus disorder prediction 810 838 - -
Lele51g1175 924 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 224 279 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1175 Lele-ChrLele51 7748014 7751808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1175 26 291 Response Regulator Gene Family AT4G31920 33.083 1.37e-37 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele51g1175 Response_reg 1.4e-11 CL0304