Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1172 ATGGAGGGTGGTAGAATTGGGAGAGAAAATGAGGGAGAGAAACTAATAAGGGAAGACGATGATCACGAGGTTCTGAAAAAGATGATTTCAAGTCATCCTCTTTATGGCCTTTTGATTGAATCTCACTTCAACTGTTTGAAGGTGGGGTTAGGCGAATTTGGAGAAGAAGAGTTTGATATAACAGATATTGCTGCATGTAAGCACAAAGCAAATAATTCTGAGCTCAAAACCACTACAGCTACAACTCCAAGTTTTACAGAACTTGATCACTTCATGGAAGCATATTGCATGGCGCTTAGCAGCCTGAAAGAAGCGATTGAAGAACCAACAAAAGAAACAAGAGAGTTCATAAATTCAATGCACGTTGAGCTGAAGGAACTATGCAAGCCGAATCATAATAATAATAAGGCACAAGATGCTATAGAGTGCAGCCGCAAGAAGAATCTTTGA 450 0.3956 MEGGRIGRENEGEKLIREDDDHEVLKKMISSHPLYGLLIESHFNCLKVGLGEFGEEEFDITDIAACKHKANNSELKTTTATTPSFTELDHFMEAYCMALSSLKEAIEEPTKETREFINSMHVELKELCKPNHNNNKAQDAIECSRKKNL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1172 149 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 9 131 - -
Lele51g1172 149 SMART KNOX2_2 78 129 IPR005541 GO:0003677|GO:0005634
Lele51g1172 149 Pfam KNOX2 domain 87 128 IPR005541 GO:0003677|GO:0005634
Lele51g1172 149 SMART KNOX1_2 23 69 IPR005540 GO:0003677|GO:0005634
Lele51g1172 149 Pfam KNOX1 domain 25 49 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1172 Lele-ChrLele51 7726376 7727593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1172 21 129 Homeobox Transcription Factor Family AT4G08150 32.143 2.90e-13 63.9