Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1171 ATGGTAAAATCGTCCGATAATGGTTTTGGTTCTGTGGCGCCTTTCCTGAAAAAATGTTATGAGATGGTGGATGATGAGTCGACCGACTCGCTCATATCCTGGAGCAAAAGCAATGATAGTTTTATCATCTGGGACATGACTGAGTTCTCTGTGCGTTTGCTTCCCAAGTATTTCAAGCACAACAATTTCTCCAGTTTCATCAGGCAACTTAATATTTATGGTTTCAGGAAAACTGATACGGATCGCTGGGAATTTGCCAATGATGACTTTATCAGAGGTCAAAAGCATTTACTGAGGAATATATTGAGAAGAAAACATCCACATGTTGCAGATCAGCGAAAGCCATCGCAGCAGCAAGAGAATCGTGATGTGCCTTCTCAGGAAGTTAAAAACCATGACCTATGGAAAGAAGTCGAGAATTTGAAAACTGATAAAAATGCACTCACACAGGAGTTGGTTAAACTTAGGCAGCACCAGGAATCATCTAAGAACAGGTTGCTGCTCCTGACCAATCGGCTTCAAGGAATGGAAAAGAATCAACAACAGATGTTATCATTCTTAGTCATGGCCATGCAAATCCCTGGTTTCATGGTTCAGCTGCTTCAGCCCAAGGAAAACGGTTGGCGTACAACTGAGACAAGCAATATGTTGGAACACAGTGCTTCTGATGGGATGATAATGAAGTATCAACGACCCTTGAGTGAAAAATTGAAGCCTTTAGTTTCACCATCTCGTGTTTCCAATGAGCAACCAGAACCCGGTCTCTGTACCGATGGGTTGAAAGATTATTTCATCAATTCTGGCTTCTTGAAAGTACTCATGGATGAAAAAATGTGTCAAATAGATCATCATTCTCCATTTATTCTACCGGATTCACCCGATGATAATAATGCCTGGGAACAGCTTCTTTTAGGCAGTCCCTTCACTGAAAATGAAGATTCAAATCCGGAAAGCGACAGGCCCACCAACAATGGAATGGAGATTGAGCCGGCCATATGTGAAACACTGGTCGATAAATTCCAAAATTGTGTCGGGTTGATTCCAGAAATGGACAAAACTCAGAAGAGTGGATTGGAAGTATCTGCTAATGATGTTCATTTGGAGAAGCTGCAGAGTTTGGAATCTCTAACTGAGCAAATTGAACTTTTGGCTTATGAAGCAAATGAGGAATAG 1173 0.4143 MVKSSDNGFGSVAPFLKKCYEMVDDESTDSLISWSKSNDSFIIWDMTEFSVRLLPKYFKHNNFSSFIRQLNIYGFRKTDTDRWEFANDDFIRGQKHLLRNILRRKHPHVADQRKPSQQQENRDVPSQEVKNHDLWKEVENLKTDKNALTQELVKLRQHQESSKNRLLLLTNRLQGMEKNQQQMLSFLVMAMQIPGFMVQLLQPKENGWRTTETSNMLEHSASDGMIMKYQRPLSEKLKPLVSPSRVSNEQPEPGLCTDGLKDYFINSGFLKVLMDEKMCQIDHHSPFILPDSPDDNNAWEQLLLGSPFTENEDSNPESDRPTNNGMEIEPAICETLVDKFQNCVGLIPEMDKTQKSGLEVSANDVHLEKLQSLESLTEQIELLAYEANEE 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1171 390 MobiDBLite consensus disorder prediction 105 129 - -
Lele51g1171 390 Coils Coil 138 165 - -
Lele51g1171 390 PRINTS Heat shock factor (HSF) domain signature 15 38 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele51g1171 390 PRINTS Heat shock factor (HSF) domain signature 53 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele51g1171 390 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele51g1171 390 Gene3D - 9 105 IPR036388 -
Lele51g1171 390 SUPERFAMILY "Winged helix" DNA-binding domain 11 104 IPR036390 -
Lele51g1171 390 SMART hsfneu3 11 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele51g1171 390 Pfam HSF-type DNA-binding 15 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele51g1171 390 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 233 IPR027725 -
Lele51g1171 390 FunFam Heat shock transcription factor 1 9 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1171 Lele-ChrLele51 7719098 7722316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1171 1 384 HSF AT1G67970 44.417 7.94e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele51g1171 HSF_DNA-bind 7.2e-31 CL0123