Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1160 ATGTGGAATGGCCTCCTTAAACCTCTACCATTAATTCTCTGCTTTCATTTTCCTTCGTTTTCTAGGCTGATTTACCCAGGAAATGACATGGAGAAAACACAACTCAATTTTGGGGTTTCTTTTGGAACTTATCGTCTTGTTTTGGTGCTATCTGTGGCAATTTCGGCTTTGTCTCAGAATGATGCGGAGGTGATGAATATTCTTAAGAAGGCGATCAATCCCCCACCTAGTCTCAGATGGACGAACACTGACGTTTGCAAATGGCGACGTGTGGATTGCAACTCTGGAAAACGTGTCATTTCCATTCAGATTGGGAACTTGAATTTGCAAGGTTTGCTTCCGAAAGAACTCGAGAATCTCTCAGAGTTGCAGCTATTTGAATGCCCACAGAACCATCTAACAGGTCAAGTTCCATATTTATCCAAGACACTACAAAGACTTGTGATCGGAGATAACAAGTTCAGCTCCTTCCCTGATGATTTCTTCAGAGGAATGACAAAGTTACAAGAAGTAAGAATTGGAAATAACCCATTTTCCCCATGGTCTCTTCCGAATAGTCTCAAGGATTGTGTAGCACTCCATACATTCGAAGCAACAAATGCAAATTTCATTGGAACAATCCCGGAGCTTTTAGGTACCATGCCAGGTTTAGTTTCTTTAGTCTTGAATTCTAATAGTCTTGAAGGTGGCTTGCCTGCGAGTTTTGCCGATGGGTCAATTGAGGAACTTTTGTTGAACACTCAGAATGGTAACTACAAACTCAATGGCACAATTAAGGTGCTTCAAAACATGACATCCTTAAAAAAAGTTTGGCTACATGGTAATTCATTTACAGGTCCAATACCAGACTTGTCTAACCATGATCAATTGTTTGATGTGAGTTTAAGGGACAACCAATTGGCTTGTGTTGTCCCATCATCTCTTATGGCTCTTCCAAGTTTACAGGTTGTGAATTTGACTAACAATTTCCTTCAAGGGCCAATTCCAACATTCAAATCAAATGTGGTTGTTGATATATCAGGAATTAATCGATTTTGCACAACCATCCCAAATCAGCCATGTAGTTCTGTCGTGAATGCTTTACTCTCTGTTGTTGAATCCTTAGGATGTCCTGTGAAATTGGCAGATAATTGGAAGGGAAATGATCCTTGTAATGGCACTTGGACAGGAATAGTGTGTTCTGGGGGAAACATTTCAATTGTTAATTTTGAGGATATGGGTTTGTCAGGCACAATTTCCCCAACTTTTGCCTCACTTACATCTGTGACAAAATTGCTTCTTGCCAATAATTCAATCACGGGTCCCATACCAAATGAACTCACTACCATGCCCAATCTACGAGAGCTAGATGTTTCAAATAACAATTTAGAAGGCTATGTACCATCTTTTCCTAAAAAAAGTATGATTATTAGAAAAGATGGGAATCCTAATCTTGGAAAACTTCTTGATGAATCATCACCTAGCTCAAATTCTGGAGGTAATGGTAACAAGAAAAAAGACCAACTTTCAATATTCATCGCGGGCATCGCGGTTGGCTTAATGATTTTACTTGTTATACTAGTTATAATGTCTTACATGTTTGTTAGAAAACGTAATTATTTTGGCCAGTTTAGAGTTCTAATAGCGAAGTTGATACATCCTCGTGATGGAGAAATTGGAAAAGTTATGAAGATCGACGTTGAAGGTGGTGGTGATACTAATAAAGGAGATGTCCAAGGTATGGTAATTCCAATTCAAGTTCTGAAACAAGTCACAAACAATTTTAGTAACGCAAACATATTAGGAAAAGGAGGTTTTGGAACTGTGTACAAAGGTGAACTACATGATGGAACAAAGATTGCAGTGAAAAGAATGGATTCAGGATTGTTAATGGAGAAGGCACTACATGAATTCCGAGCCGAAATCTCGGTGCTTACGCAGGCTCGTCACAAACATTTGGTGGCACTTTTGGGATATTGCTTAGATGGAAATGAGAAGCTTCTTGTGTATGAATACATGCCTCAAGGAGCACTTAGTAAGCATTTGTATAGTTGGAAAGAGAATGGATTGGAACCTCTGAATTGGACAAAAAGATTGAGCATTGCCTTGGATGTAGCTAGAGGTGTTGAGTATCTTCATGCTTTAGCTCAACATAGTTTTATTCATAGAGATCTTAAGCCATCCAACATTCTTCTGGGAGATGATATGCGAGCTAAAGTATCAGACTTCGGATTAGTCCGGCTCAATGCTGAAGGAAGAAATTCGGTCGAAACTAGGCTTGCCGGAACTTTCGGATATCTTGCCCCTGAGTATGCAGCAACTGGGCGAGTTACTACAAAGGTTGATGTTTATAGTTTTGGAGTGGTTCTTATGGAGATGATAACAGGGAGGAGAGTGCTTGACGATAGCCTACCAGAGGAAGACTTCCACCTGGTAATGTGGTTCCGACGAACGATGCAGAACAACGACTCGTGTCGAAAGGTGATTGATCCTGTCATTGATGCTGATGATGGTGCAATCATGTCAAGCATTAGGACTGTGTCAGAGTTGGCTGGCCATTGCTGTGCAAGTGAGCCTCATCAACGTCCTGACATGGGCTATGTAGTAAATGTACTATCTTCTCTTGTTCATCAGGCTGCATGGAAGCCCATGGAATCAAGTTGTTCTGATGATAATGATGCTAATAAGTATGGCATTGATCTTCACATGAGTTTGCCGCAAGCACTTACGAAGTGGCAATCTTTGGAAGGACAAAGCAGTTCTCAATCATTTCTCACAAAATAA 2763 0.4025 MWNGLLKPLPLILCFHFPSFSRLIYPGNDMEKTQLNFGVSFGTYRLVLVLSVAISALSQNDAEVMNILKKAINPPPSLRWTNTDVCKWRRVDCNSGKRVISIQIGNLNLQGLLPKELENLSELQLFECPQNHLTGQVPYLSKTLQRLVIGDNKFSSFPDDFFRGMTKLQEVRIGNNPFSPWSLPNSLKDCVALHTFEATNANFIGTIPELLGTMPGLVSLVLNSNSLEGGLPASFADGSIEELLLNTQNGNYKLNGTIKVLQNMTSLKKVWLHGNSFTGPIPDLSNHDQLFDVSLRDNQLACVVPSSLMALPSLQVVNLTNNFLQGPIPTFKSNVVVDISGINRFCTTIPNQPCSSVVNALLSVVESLGCPVKLADNWKGNDPCNGTWTGIVCSGGNISIVNFEDMGLSGTISPTFASLTSVTKLLLANNSITGPIPNELTTMPNLRELDVSNNNLEGYVPSFPKKSMIIRKDGNPNLGKLLDESSPSSNSGGNGNKKKDQLSIFIAGIAVGLMILLVILVIMSYMFVRKRNYFGQFRVLIAKLIHPRDGEIGKVMKIDVEGGGDTNKGDVQGMVIPIQVLKQVTNNFSNANILGKGGFGTVYKGELHDGTKIAVKRMDSGLLMEKALHEFRAEISVLTQARHKHLVALLGYCLDGNEKLLVYEYMPQGALSKHLYSWKENGLEPLNWTKRLSIALDVARGVEYLHALAQHSFIHRDLKPSNILLGDDMRAKVSDFGLVRLNAEGRNSVETRLAGTFGYLAPEYAATGRVTTKVDVYSFGVVLMEMITGRRVLDDSLPEEDFHLVMWFRRTMQNNDSCRKVIDPVIDADDGAIMSSIRTVSELAGHCCASEPHQRPDMGYVVNVLSSLVHQAAWKPMESSCSDDNDANKYGIDLHMSLPQALTKWQSLEGQSSSQSFLTK 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1160 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 713 725 IPR008271 GO:0004672|GO:0006468
Lele51g1160 920 Gene3D Ribonuclease Inhibitor 356 481 IPR032675 -
Lele51g1160 920 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 666 879 - -
Lele51g1160 920 SMART serkin_6 588 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1160 920 Pfam Leucine Rich Repeat 445 462 IPR001611 GO:0005515
Lele51g1160 920 ProSitePatterns Protein kinases ATP-binding region signature. 594 616 IPR017441 GO:0005524
Lele51g1160 920 SUPERFAMILY L domain-like 66 464 - -
Lele51g1160 920 Gene3D Phosphorylase Kinase; domain 1 564 665 - -
Lele51g1160 920 Gene3D Ribonuclease Inhibitor 58 350 IPR032675 -
Lele51g1160 920 Gene3D Transferase(Phosphotransferase) domain 1 666 889 - -
Lele51g1160 920 PANTHER OSJNBA0070M12.3 PROTEIN 47 913 - -
Lele51g1160 920 FunFam Leucine-rich repeat receptor-like kinase 356 481 - -
Lele51g1160 920 FunFam receptor-like protein kinase FERONIA 558 665 - -
Lele51g1160 920 ProSiteProfiles Protein kinase domain profile. 588 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1160 920 Pfam Leucine rich repeat N-terminal domain 59 94 IPR013210 -
Lele51g1160 920 Pfam Leucine rich repeat N-terminal domain 359 394 IPR013210 -
Lele51g1160 920 FunFam Receptor-like kinase TMK4 59 351 - -
Lele51g1160 920 CDD STKc_IRAK 594 868 - -
Lele51g1160 920 Pfam Protein tyrosine and serine/threonine kinase 592 863 IPR001245 GO:0004672|GO:0006468
Lele51g1160 920 SUPERFAMILY Protein kinase-like (PK-like) 577 879 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1160 Lele-ChrLele51 7664010 7667419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1160 99 868 Receptor kinase-like Gene Family AT5G07280 30.944 4.29e-84 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lele51g1160 PK_Tyr_Ser-Thr 2.1e-47 CL0016