Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1159 ATGGCGCGATCCGCTCTTCCTGCAAAATGCCTCCCCACTCATGCGGAGTTCCCCCTGCTGATTTTCCCGGTAAATGACATGGAGAAACCCCAAATCGGTTTTGGGGTTTCTTTTGTAATTTATCGTCTGATTTTGGTGTTGTCTGTGGCGATTTCGGCTGTGTCTCAGAGTGATGCAGCGGTGATGAAAATTCTTAAGGCGGCAATCAATGCCCCACCTAGCCTCGGATGGACGGACACTGACGTCTGCAAATGGCAACGTGTGGATTGCAATTCTGGAAAACGAGTCATTGCCATTCAGATCGCGAACTTGAATTTGCAAGGTTTGCTTCCTAAAGAACTTGAGAATCTCTCGGAGTTGCAACGATTTGAATGCCCACAGAACGGGCTCACAGGTCCAGTTCCATATCTATCCAAGACATTGCAAAAACTTGTGATCCGAGATAACAAGTTCAGCTCCATCCCTAATGATTTCTTCAAGGGAATGACAATGTTACAAGAAGTAAGAGTTAGAAATAACCCATTTTCGCGATGGTCTATTCCGAATAGTCTTAAGGATTGCGTAGCACTCCAGACATTCGTAGCAACAAATGCAAATTTGGTTGGAACGATCCCAGATTTTTTAGGTACCATGCCAGGTTTAGTTTCCTTAGTCCTGAATTCTAATAGTCTTGAAGGTGGCTTGCCTGCAAGCTTTGCAAAGAGTTCAATCGAGGAACTTTGGCTGAATGCACAAAATGGTAATCATAAACTTAATGGCACAATTGATGTGTTGCAGAACATGACATCCTTAAAACTAGTTTGGCTACATGATAATTCATTTACTGGTAAAATACCAGACATGTCAAACCATGATCAGTTGTCTGATGTGAGTTTAAGGGATAACCAATTGGCTTGTGTTATCCCATCATCTCTTATGGCTCTTCCAAGTTTAAAGGTTGTGAATTTGACTAACAATTTCCTTCAAGGGCCCATTCCAACATTTAAATCAGGTGTGATTGTTGATATGTCTGGGATTAATCGGTTTTGCACAAACATCCCAAATCAGCCATGTAGTCCTCTTGTGAATGCTTTACTTTCTGTTCTTGAACCCTTAGGATGTCCTGTGAAATTGGCTGATAATTGGAGGGGCAACGATCCTTGTAATGGTAGTTGGACAGGAATAGTGTGCGCTGGGGGTAACATTTCAATTATCAATTTTCAGAACATGGGCTTGTCAGGCACTATTTCTCCTAATTTTGCCTTACTCACTTCTGTCACAAAATTGCTCCTTTCTAATAATTCACTCACGGGTCCTATACCAAATGAGCTCACTACAATGCCCACTCTAAAAGAGCTAGATGTTTCAAATAACAACTTAGGAGGTTTTGTGCCATCTTTTCGTCAGCCAGGTATAGATCTTAAAACAGATGGGAATCCTGATCTTGGAAAACCTCTTAAATCACCGGGCTCATCAGATTCTGAAGGTAATGGTGCCCATGAGAATAACAAACTCGCTGCATTCATTATTGGCATTGTTGTTGGTTTAGTGAGTTTATTTGCTATAGCAACTCTTGTGTTCCTTAGGTTTCTTAAGAAACGTAATTATTCAGGCAAGTTTGGAGGTCTAATAGCGAAGCTAATAGGTCCTCGTTATGATGGAGCTGGGAAAGGTATGGACGTTAATGTTTCAGGTGTTGTTCGTACTACTAGTCATGGTGATGCCCAAAGTATGGTAATTCCAATTCAAGTTCTGAGAGAAGTCACTGGCAATTTCAATAGTGCAAACATACTAGGAAAGGGTGGTTTTGGCACTGTTTACAAAGGTGAACTGCAAGATGGAACAAAGATGGCAGTGAAAAGAATGGAATCAGGATTGTTGATGGAGAAGGGACTGAGTGAATTTCGAGCTGAACTCTCAGTGCTTACGCAGGCTCGTCACAAACATTTGGTGGCACTTATGGGATATTGCTTGGAGGGAAATGAGAAGCTTCTCGTGTATGAATACATGCCCCAAGGACCACTTAGCAAGCATCTGTTTAGCTGGAAAGTGAGTGGATTGGAACCTCTGGATTGGACAAGAAGACTAAGCATTGCCTTGGATGTAGCTAGAGGTGTTGAGTATCTCCATACTTTGGCTCAACAAAGCTTTATTCATAGAGATCTTAAGCCATCCAACATTCTTCTTGGAGATGATATGCGTGCTAAAGTATCAGATTTTGGATTAGTCCGGCTTGCTCCTGAAGGAAGACATTCAGTTGAAACTAGGCTTGCTGGAACTTTCGGATATCTTGCACCTGAGTATGCAGCAACTGGGCGAGTTACTACAAAGGTTGATGTGTACAGTTTCGGAGTGGTGGTAATGGAGATGATAACGGGGAGGAGAGTGCTTGATGATAGCCTACCAGAGGAAGACTTCCACCTGGTGACGTGGTTCCGGCGGATGATGCAGAACAATGACAATGACTCGCTTCGAAAGCTCATCGATCCCACCATTAACGCCGATGATGAAGCAACCATGTCGAGCATTAGGACGGTGTCAGAGTTGGCCGGACATTGCTGTGCAAGTGAGCCTCATCAACGTCCCGACATGAGCCATGTAGTGAATGTCCTATCGCCTCTGGTTCAGGCATGGAGGCCCCAAGAATCTGGAGATGATGGCGGCAAGTACGGCCTTGACTTGGATCTGAGTTTGCCGCAAGCACTCAGAAAATGGAAATCTTTGGAAGGAAATAGCACAGTGGTGGAAGGATCGTATGCCTCTCAATCATTTGTCACAAAATAA 2763 0.4336 MARSALPAKCLPTHAEFPLLIFPVNDMEKPQIGFGVSFVIYRLILVLSVAISAVSQSDAAVMKILKAAINAPPSLGWTDTDVCKWQRVDCNSGKRVIAIQIANLNLQGLLPKELENLSELQRFECPQNGLTGPVPYLSKTLQKLVIRDNKFSSIPNDFFKGMTMLQEVRVRNNPFSRWSIPNSLKDCVALQTFVATNANLVGTIPDFLGTMPGLVSLVLNSNSLEGGLPASFAKSSIEELWLNAQNGNHKLNGTIDVLQNMTSLKLVWLHDNSFTGKIPDMSNHDQLSDVSLRDNQLACVIPSSLMALPSLKVVNLTNNFLQGPIPTFKSGVIVDMSGINRFCTNIPNQPCSPLVNALLSVLEPLGCPVKLADNWRGNDPCNGSWTGIVCAGGNISIINFQNMGLSGTISPNFALLTSVTKLLLSNNSLTGPIPNELTTMPTLKELDVSNNNLGGFVPSFRQPGIDLKTDGNPDLGKPLKSPGSSDSEGNGAHENNKLAAFIIGIVVGLVSLFAIATLVFLRFLKKRNYSGKFGGLIAKLIGPRYDGAGKGMDVNVSGVVRTTSHGDAQSMVIPIQVLREVTGNFNSANILGKGGFGTVYKGELQDGTKMAVKRMESGLLMEKGLSEFRAELSVLTQARHKHLVALMGYCLEGNEKLLVYEYMPQGPLSKHLFSWKVSGLEPLDWTRRLSIALDVARGVEYLHTLAQQSFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGRHSVETRLAGTFGYLAPEYAATGRVTTKVDVYSFGVVVMEMITGRRVLDDSLPEEDFHLVTWFRRMMQNNDNDSLRKLIDPTINADDEATMSSIRTVSELAGHCCASEPHQRPDMSHVVNVLSPLVQAWRPQESGDDGGKYGLDLDLSLPQALRKWKSLEGNSTVVEGSYASQSFVTK 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1159 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Lele51g1159 920 Pfam Protein tyrosine and serine/threonine kinase 589 864 IPR001245 GO:0004672|GO:0006468
Lele51g1159 920 Gene3D Phosphorylase Kinase; domain 1 553 662 - -
Lele51g1159 920 Pfam Leucine rich repeat N-terminal domain 57 91 IPR013210 -
Lele51g1159 920 Pfam Leucine rich repeat N-terminal domain 373 390 IPR013210 -
Lele51g1159 920 PANTHER OSJNBA0070M12.3 PROTEIN 43 908 - -
Lele51g1159 920 FunFam receptor-like protein kinase FERONIA 551 662 - -
Lele51g1159 920 Pfam Leucine Rich Repeat 443 459 IPR001611 GO:0005515
Lele51g1159 920 MobiDBLite consensus disorder prediction 461 491 - -
Lele51g1159 920 FunFam receptor protein kinase TMK1 663 882 - -
Lele51g1159 920 SUPERFAMILY Protein kinase-like (PK-like) 570 864 IPR011009 -
Lele51g1159 920 Gene3D Transferase(Phosphotransferase) domain 1 663 879 - -
Lele51g1159 920 Gene3D Ribonuclease Inhibitor 354 477 IPR032675 -
Lele51g1159 920 SUPERFAMILY L domain-like 355 460 - -
Lele51g1159 920 CDD STKc_IRAK 591 867 - -
Lele51g1159 920 ProSiteProfiles Protein kinase domain profile. 585 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1159 920 FunFam Leucine-rich repeat receptor-like kinase 353 478 - -
Lele51g1159 920 Gene3D Ribonuclease Inhibitor 55 347 IPR032675 -
Lele51g1159 920 ProSitePatterns Protein kinases ATP-binding region signature. 591 613 IPR017441 GO:0005524
Lele51g1159 920 FunFam Receptor-like kinase TMK4 56 348 - -
Lele51g1159 920 SUPERFAMILY L domain-like 62 328 - -
Lele51g1159 920 SMART serkin_6 585 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1159 Lele-ChrLele51 7659379 7662904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1159 96 864 Receptor kinase-like Gene Family AT5G07280 30.741 4.41e-84 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lele51g1159 PK_Tyr_Ser-Thr 1.4e-46 CL0016