Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1155 ATGTTTCATCCCCTTTGTTTTGCTTCTGTGGATTCGTCTCCGTTTGGTCTCCTCCAGTCCTGCTGCTACTCCGAACTAGACTCGCTCTCTCTGAGCATGGTTGTTTTACGTGCTCTCAGATCTTCAAAGCTCATCTCATGGAAACCGACTGGCAGGCTTCAGCAAACCATAGCAGGTTTTGTTGAGCGGCGAGGTAATACTTTACACTCGGGAAAGCCTTCAGTAGTCAAACTTTGTCCTGGATTTGTTGGAGAAGGGAGGTATTTCGATTTCCGGTCCAATTCGATACCAGCGTCGATTGATTTTGCCCACATGTCACCTCTCTGCACCACATTGTGTAAAGATGGTTTCAGAGTACGAACTGTTGAGCACTTGCTTTCTGCTTTGGAGGCGACTGGTGTTGATAATTGCAGAATTGAGATAGAAAATTGGGATTCTGAAGGAAATTGTGCTGAGATCCCTATATTTGATGGGTCAGCTAGTGAATGGGTAGCAGCAGTTGAAGAAGTTGGTGTAAAGGCTGCAACTGATCACCATGGCAATAGTTGTGAAAAATTAGCTCCACATCTGAATGAACCAACGTACGTTTTTAGGAATGATTCTTTTGTTGCTGCATTTCCTTCAACAATGGTTCAAATAACCTATGGAATTAACTTTCCGCAGGCAAGTGCTATTGGATGCCAGTGGTTTTCAACCCCCTTGGACTATTTACTTTATTCCAAACAGATAGCTTTGTCAAGAACCTTCTGCATTTACGAGGAGATTGAACAAATACGCAATGCTGGACTGATTAAAGGAGGTAGTCTAGAAAATGCTATTGTTTGCAGTGCCCATAATGGTTGGTTGAATCCGCCTTTGCGTTTCAACGATGAACCATGTCGCCATAAGGTCCTAGATCTTGTAGGAGATCTTTCCCTTTTTGCTCAGTTTGGGAATCAAGGAGTTCCAGTGGCACACGTTGTAGCTTACAAGGCTGGCCATGCATTGCATGCTGATCTGGTACACCGCCTGATAGGAACGATTTGA 1026 0.4415 MFHPLCFASVDSSPFGLLQSCCYSELDSLSLSMVVLRALRSSKLISWKPTGRLQQTIAGFVERRGNTLHSGKPSVVKLCPGFVGEGRYFDFRSNSIPASIDFAHMSPLCTTLCKDGFRVRTVEHLLSALEATGVDNCRIEIENWDSEGNCAEIPIFDGSASEWVAAVEEVGVKAATDHHGNSCEKLAPHLNEPTYVFRNDSFVAAFPSTMVQITYGINFPQASAIGCQWFSTPLDYLLYSKQIALSRTFCIYEEIEQIRNAGLIKGGSLENAIVCSAHNGWLNPPLRFNDEPCRHKVLDLVGDLSLFAQFGNQGVPVAHVVAYKAGHALHADLVHRLIGTI 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1155 341 TIGRFAM lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 54 338 IPR004463 GO:0008759|GO:0009245
Lele51g1155 341 SUPERFAMILY Ribosomal protein S5 domain 2-like 193 338 IPR020568 -
Lele51g1155 341 SUPERFAMILY Ribosomal protein S5 domain 2-like 53 174 IPR020568 -
Lele51g1155 341 Gene3D lpxc deacetylase, domain 1 52 179 IPR015870 GO:0008759|GO:0009245
Lele51g1155 341 Gene3D lpxc deacetylase, domain 2 189 340 IPR011334 GO:0008759|GO:0009245
Lele51g1155 341 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 36 339 IPR004463 GO:0008759|GO:0009245
Lele51g1155 341 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 54 338 IPR004463 GO:0008759|GO:0009245
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1155 Lele-ChrLele51 7626786 7635084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1155 41 337 Carbohydrate Esterase AT1G25054 64.094 5.74e-142 403