Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1133 ATGGCTCGTTCTCTGCACCAACTTGTTTCTTCCATCTTCGTCCTCTTCCTTCTCCTCCTGGCCACAGGGATGGGGCCAAGAATGGTGGCAGAAGCAAGGACATGCGAGTCAAAGAGCCAACGCTTCAGAGGAATATGTGTGAGGTCCTCTAACTGTGGCACTGTCTGCCAGTCGGAGGGCTTCTCCGACGGTCACTGCCGTGGCCTCCGCCGCCGTTGCTTCTGCACCAAACATTGCCAATGA 243 0.5597 MARSLHQLVSSIFVLFLLLLATGMGPRMVAEARTCESKSQRFRGICVRSSNCGTVCQSEGFSDGHCRGLRRRCFCTKHCQ 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1133 80 Pfam Gamma-thionin family 33 79 - -
Lele51g1133 80 Gene3D - 33 79 IPR036574 -
Lele51g1133 80 SMART gth_4 34 79 IPR003614 GO:0006952
Lele51g1133 80 CDD Knot1 44 76 IPR003614 GO:0006952
Lele51g1133 80 ProSitePatterns Gamma-thionins family signature. 33 56 IPR008176 GO:0006952
Lele51g1133 80 PANTHER DEFENSIN-LIKE PROTEIN 1 11 79 - -
Lele51g1133 80 PRINTS Purothionin signature 34 49 IPR008176 GO:0006952
Lele51g1133 80 PRINTS Purothionin signature 64 78 IPR008176 GO:0006952
Lele51g1133 80 SUPERFAMILY Scorpion toxin-like 33 79 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1133 Lele-ChrLele51 7515773 7516173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1133 7 79 Plant Defensins Gene Families AT2G02100 60.274 3.50e-30 100