Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1130 ATGGATCCAGGAGCTCTGATGAACGAGGGTTCGTTTGCGAATGGAGGGGCTAATACGGCGCCGTTTAACCTGGCCGATATCTGGCAATTTCCGATGAATGTCGGTGCTGGTCTCGGTGATTCCGGGGGTGGGTTGGGGCTGAGGAGGCCACAGTTCGGGCATAATTTTGGGCCGCCGCCGTTCGGTGATTTTCCTGATCATACAAATCTGGATGTACCCGGTAATGATCAAATCAGCTCGGAGCAGAGAGGGAATAATAATAATAACAATAATAGGAAGCGTCGCGATTCCGAGGATGAGTCCAACAAGGGCGTCTCCACCAGTAATGGCGGCAATGGCGTGAATGATGGTGGTGAAGGAAAACGGATTAAAGCTTCAGCGAATAGGAATGAGAGTCGAGACACTAAAGCTGAAGCAGAGCCCAGTTCAGGAAAGCCTGCGGAGCAAAATAACGAGCAACATCCTCCTGAGCCTCCTAAGCAAGATTACATTCATGTTCGAGCAAGAAGAGGTCAAGCTACTGATAGTCACAGTCTAGCAGAAAGAGCTAGAAGGGAGAAGATAAGTGAGAGGATGAAAATTCTTCAGGATTTGGTCCCTGGATGTAATAAGGTTAATGGGAAAGCACTGGTCCTTGATGAGATTATAAATTATATCCAATCACTACAGCGCCAAGTTGAGTTCCTGTCTATGAAACTTGAAGCTGTAAATTCAAGACTGAACCCTGGCATCGAAGTCTTTCCTCCTAAAGATTTTGGTCAACAATCATTTGAAACGGTTGGCATGGCATTTGGCTCACAAGCTACAAGAGAGTATAGCCGGGGTTCGTCGCCGGAGTGGTTACATATGCAGTGGCTGCCCAGGAAAACATATACTCAAGATATTAAGTTGAATGAATAG 900 0.4678 MDPGALMNEGSFANGGANTAPFNLADIWQFPMNVGAGLGDSGGGLGLRRPQFGHNFGPPPFGDFPDHTNLDVPGNDQISSEQRGNNNNNNNRKRRDSEDESNKGVSTSNGGNGVNDGGEGKRIKASANRNESRDTKAEAEPSSGKPAEQNNEQHPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVNGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNPGIEVFPPKDFGQQSFETVGMAFGSQATREYSRGSSPEWLHMQWLPRKTYTQDIKLNE 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1130 299 Pfam Helix-loop-helix DNA-binding domain 176 223 IPR011598 GO:0046983
Lele51g1130 299 MobiDBLite consensus disorder prediction 88 102 - -
Lele51g1130 299 Coils Coil 219 239 - -
Lele51g1130 299 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 170 240 IPR036638 GO:0046983
Lele51g1130 299 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 222 IPR011598 GO:0046983
Lele51g1130 299 Gene3D - 169 243 IPR036638 GO:0046983
Lele51g1130 299 MobiDBLite consensus disorder prediction 72 87 - -
Lele51g1130 299 FunFam Basic helix-loop-helix transcription factor 169 241 - -
Lele51g1130 299 SMART finulus 178 228 IPR011598 GO:0046983
Lele51g1130 299 CDD bHLH_AtBPE_like 162 247 - -
Lele51g1130 299 MobiDBLite consensus disorder prediction 49 161 - -
Lele51g1130 299 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 76 263 IPR024097 GO:0006355
Lele51g1130 299 MobiDBLite consensus disorder prediction 122 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1130 Lele-ChrLele51 7486316 7488703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1130 1 272 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 54.380 7.56e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele51g1130 HLH 1.7e-08 No_clan