Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1120 ATGGCTTCTTCTTCTTCCTCCAATGTGAAGCCATGGCTTTGTTTAAGCTTTCTCTTCGTTCTTCAAACTTCTCTGCTCTCACCAATCTGTAATTGTCAGCCTCAGAACATCGAAACCTTCTTTCCAACTGAAACTCCATCCCCAGCTCCTCCACCGAGCATCTCTCCATCGCCGCCGGTTGTCCCTCCGTTGTCGCCGGTGCCGGCGGGAACAACCAGAAGTTCTTCATCATCATCGAACAGTAAGGTAGGGAAGGCCGTGGCTATTACTGCAGCAAGCACTGTTGTTGTTTCTGCGTTAGTCTTCTTCTTTATCCGATGGTGTTTAAAGAAAAGACGCAGAGAAGAGAGACGTGTGCGCTCTGCTTCGGAACCTTGTGATGGAAATGGAAGAGACGTTGAAACTCAGACGAACGCGTTCGAGAGAATTGAAGGGAATGTTAAGGGATTGATTGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGGAAACTTCAAGAGAAGAAGAATAGCTCCAAGAAGGGATTACAGAGAGAGGTTCGAACCATCGCTAAAGAACAAGATCATCAAGAACAAGAAGTAGAAGTAGAAGAAGAAGATGATGATGGGGGAAATCGTAGCCGGAAAAAACCTGAGCCTGTTCAAGAAATCCCTCTGCTTCGTGGAAAGTCTTCGGCTTCCGAGAAGAACTTGTTAATATCAGAAGATGAACATGGGTCGAACCGGAGTTGGAGTTGGAGGAGAACGTTGTCTCGAAAAATAGCCCCACCATCTCTTCCTCCTCCGGTGACCACGACGGCGGCGACTGTTTCACCACCATTACCACCACCACCCGCCGCTTATTTTTCTGCGGTTTCAAAGGCGAAAAACGTTGAGCCACCGCCACCATCCAATGTTGCCGCTGCTTCTTCTTCTGTTTCACCACCGTTACCACCGCCACCTTCTGCTTACTTTTCTGCTGTTAACAAAACGAAAAGCACTGAACAACCACCACCTCCACCTCAACCTCCTCCTCCGTCAATTCCAGATAAAAAGAGTCCAGCGCCGCCTCCCCCGCCTCCAACTGCGCAGGCTAAAAAGAGTCCAGCACCACCACCACCTGCTCCGCCCATGGCCGGAAAAAACTTGAGGTCATCTTCAAAACCACCACCAACCCCAGTTGAAATTTCAGGGGAAGACAATGATAAAGTGAAACTCAAGCCTTTACATTGGGATAAAGTCACCACTAATGTTGATCATTCCATGGTTTGGGACAAATTGGATCGTGGCTCCTTCAGGGTTGATCAAGATCTTATGGAAGCTCTTTTTGGATATGTGGCTACAAGCAAAAGAACACCAAGAGGGAAAGACAATTCAACTAGTCCAACCAAGGAGGCTTATTCTTCTGCTGCACAATCAAGCACAACTTTCATACTTGAATCCAGAAAATCACAGAACATTGCTATTGTTTTGAGATCTCTAGCGGTGTCGCGCCGGGAAATTCTCGATGCCCTCGATGAGGGTTCAGGCCTGAATTCGGATACAATTGAGAAGCTTGTTAGAGTTGCTCCAACACAAGAAGAACAATCTGAAATCATTGATTATAATGGAGACCCTGCAAAACTTGCTGTTGCAGAATCCTTCCTTTATGATATTCTCAAAGCTGTTCCTTCAGCTTTCAAGCGTTTGAATGCTATGCTTTTCAGGTTCAATTATGATTCTGAGATATTAGAGATCAAGGAATCTTTGAACACCCTTGAATCAGGCTGCAAGGAGCTTCGAAATCGAGGGCTTTTCATTAAACTTCTCGAAGCAGTTCTTAAGGCCGGGAACCGTATGAATGCTGGTACTTCAAGAGGGAATGCTCAAGCTTTTAACTTGACTTCTTTGAGGAAGCTCTCTGATGTGAAAAGCACAGATGGAAAAACCACATTGCTTCACTTTGTCGTCGAAGAAGTAGTCCGAACAGAGGGAAAACGGTGCGTTCTTAACCGGGATCGAAGCCTGAATCGAAGTGGAAGTAGTAGTAGGAGAATGAACTCTGAGAATGGGAACTCTGTTTCAGATGAACAGAGAGAAATGGAATACCTAAAGTTAGGGTTACCATTTGTTGGAGGAATCAGCACTGAATTCTCCAATGTGAAGAAAGCAGCCATTATAGATTACAATAGTTTAGTTTCTTCAATCTCATCGCTTTCAACTCGGATAGCAGAAATCAAACAACTTGTTTCAAAGTGTGGTGGTGGGAATGGTAATAACAAAGGAGGGAACTTTGTGAGAGAAATGGAACATTTTCTGAGAAATGCAGAGGATGAATTGAGATCAGTGAGAGATGAACAAACAAGGGTAATGCAGATTGTGAAGAAAACAACAGACTATTATCAAGGAGGAGCTTTTAAAGATAAGGCAGAGAATCTTCTGGAAATATTTGTCATTGTCAAGGATTTTCTGAGGATGGTTGATCAGGCATGTGTTGACATTGCTCGTAGTATGCAGAAGAAAAAGAAGTCAACAAAATCAAATTCTGGATTGGAATTTATGAGTGCACTCAACAAGTCATACGCGGTTCCATGTTGTGATGATCATGAGACAGCTGTAAATAATCTCGTACTCAAGAGACAATTGGATTTGGGACAGCCTGGGTTTGGAAAATTCAGGAACTAG 2643 0.4423 MASSSSSNVKPWLCLSFLFVLQTSLLSPICNCQPQNIETFFPTETPSPAPPPSISPSPPVVPPLSPVPAGTTRSSSSSSNSKVGKAVAITAASTVVVSALVFFFIRWCLKKRRREERRVRSASEPCDGNGRDVETQTNAFERIEGNVKGLIVDEDGLDVIYWRKLQEKKNSSKKGLQREVRTIAKEQDHQEQEVEVEEEDDDGGNRSRKKPEPVQEIPLLRGKSSASEKNLLISEDEHGSNRSWSWRRTLSRKIAPPSLPPPVTTTAATVSPPLPPPPAAYFSAVSKAKNVEPPPPSNVAAASSSVSPPLPPPPSAYFSAVNKTKSTEQPPPPPQPPPPSIPDKKSPAPPPPPPTAQAKKSPAPPPPAPPMAGKNLRSSSKPPPTPVEISGEDNDKVKLKPLHWDKVTTNVDHSMVWDKLDRGSFRVDQDLMEALFGYVATSKRTPRGKDNSTSPTKEAYSSAAQSSTTFILESRKSQNIAIVLRSLAVSRREILDALDEGSGLNSDTIEKLVRVAPTQEEQSEIIDYNGDPAKLAVAESFLYDILKAVPSAFKRLNAMLFRFNYDSEILEIKESLNTLESGCKELRNRGLFIKLLEAVLKAGNRMNAGTSRGNAQAFNLTSLRKLSDVKSTDGKTTLLHFVVEEVVRTEGKRCVLNRDRSLNRSGSSSRRMNSENGNSVSDEQREMEYLKLGLPFVGGISTEFSNVKKAAIIDYNSLVSSISSLSTRIAEIKQLVSKCGGGNGNNKGGNFVREMEHFLRNAEDELRSVRDEQTRVMQIVKKTTDYYQGGAFKDKAENLLEIFVIVKDFLRMVDQACVDIARSMQKKKKSTKSNSGLEFMSALNKSYAVPCCDDHETAVNNLVLKRQLDLGQPGFGKFRN 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1120 880 Gene3D Formin, FH2 domain 410 839 IPR042201 -
Lele51g1120 880 MobiDBLite consensus disorder prediction 255 280 - -
Lele51g1120 880 ProSiteProfiles Formin homology-2 (FH2) domain profile. 389 839 IPR015425 -
Lele51g1120 880 SMART it6_source 389 828 IPR015425 -
Lele51g1120 880 Coils Coil 569 589 - -
Lele51g1120 880 MobiDBLite consensus disorder prediction 173 394 - -
Lele51g1120 880 SUPERFAMILY Formin homology 2 domain (FH2 domain) 402 829 - -
Lele51g1120 880 PANTHER FORMIN-RELATED 34 825 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele51g1120 880 Coils Coil 752 772 - -
Lele51g1120 880 Coils Coil 173 193 - -
Lele51g1120 880 MobiDBLite consensus disorder prediction 201 216 - -
Lele51g1120 880 MobiDBLite consensus disorder prediction 660 680 - -
Lele51g1120 880 MobiDBLite consensus disorder prediction 327 372 - -
Lele51g1120 880 MobiDBLite consensus disorder prediction 658 684 - -
Lele51g1120 880 MobiDBLite consensus disorder prediction 44 66 - -
Lele51g1120 880 MobiDBLite consensus disorder prediction 173 191 - -
Lele51g1120 880 MobiDBLite consensus disorder prediction 41 81 - -
Lele51g1120 880 Pfam Formin Homology 2 Domain 393 814 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1120 Lele-ChrLele51 7376019 7378811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1120 378 828 FH2 protein (formin) Gene Family AT1G70140 57.205 2.11e-172 516