Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1109 ATGTCTCGCACTTGCTCGCAGTGTGGCAACAACGGCCATAACTCCCGTACATGCATCCACGGCGGCGTCGGCGCCGAATCTAAAGAGAACGGGATTATGCTGTTCGGAGTGCGACTCACCCAAGGGAACTCGTTCAGGAAGAGCGCTAGTATGACGAATCTGTCGCAGTTTGAGGCTCAAGCTCAGGATTCCAACACCGTCGACGCTGGTTACGCTTCCGACGACGTCGTTCACGCCTCCGGACGGACTCGCGAGCGGAAGAGAGGTAATATTAATATATATAACCGCGAGCTTTTTGTGGTGGTTAGTGTTGAAAATGAATGGTTTGTTTGGACTTGGAGATTGAGTATTATGTATTTGGATTTGATTGATTTTGAAGGTGTTCCATGGACGGAGGAAGAGCACAGGTTATTCCTATTGGGATTACAGAAAGTCGGAAAGGGAGATTGGAGAGGGATTTCTAAGAACTTCGTCAAAACTCGGACGCCGACTCAGGTGGCGAGTCATGCTCAGAAGTACTTCCTTCGTCGCCACCACCAGAATCGGAGACGCCGGAGATCTAGTCTCTTTGACATCACCACCGATACTGTGGTGGAAACCTCCTTAATCGAAGAAGAACAAGTTCACCAAGAAACGGCGATCCCACCCACACATCCACAGTTATATTACGGAGGCTTTCCGAGTTCATCTTTACCGACGAAGGTGATGGCCGGAGAGAGACCATCGAAGCCTATTAGGCCGCTACCAACCCTACCAGTCCCTCCGTCATCGAAAATGGCCACTCTGAATTTGAAAGATAAAGCTCCGATAGATCCCCTACCATTATCGCTGAAGCTGCCGACATCGCCCTCAACATCAAATGAGCAGTCAGCGGCAAGCAGCCAGTCATCGCCGTCACCGGATTTTCAGGCTGGCAAGTTCAGCGGCGGTGGAGATAGCATAATCAGCGTGGCTTGA 957 0.5068 MSRTCSQCGNNGHNSRTCIHGGVGAESKENGIMLFGVRLTQGNSFRKSASMTNLSQFEAQAQDSNTVDAGYASDDVVHASGRTRERKRGNINIYNRELFVVVSVENEWFVWTWRLSIMYLDLIDFEGVPWTEEEHRLFLLGLQKVGKGDWRGISKNFVKTRTPTQVASHAQKYFLRRHHQNRRRRRSSLFDITTDTVVETSLIEEEQVHQETAIPPTHPQLYYGGFPSSSLPTKVMAGERPSKPIRPLPTLPVPPSSKMATLNLKDKAPIDPLPLSLKLPTSPSTSNEQSAASSQSSPSPDFQAGKFSGGGDSIISVA 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1109 318 Pfam Myb-like DNA-binding domain 129 174 IPR001005 -
Lele51g1109 318 ProSiteProfiles Zinc finger CCHC-type profile. 5 18 IPR001878 GO:0003676|GO:0008270
Lele51g1109 318 SUPERFAMILY Homeodomain-like 127 177 IPR009057 -
Lele51g1109 318 ProSiteProfiles SANT domain profile. 130 178 IPR017884 -
Lele51g1109 318 FunFam transcription factor MYB1R1 128 179 - -
Lele51g1109 318 MobiDBLite consensus disorder prediction 278 303 - -
Lele51g1109 318 MobiDBLite consensus disorder prediction 232 318 - -
Lele51g1109 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 178 IPR017930 -
Lele51g1109 318 Gene3D - 128 179 - -
Lele51g1109 318 CDD SANT 129 174 IPR001005 -
Lele51g1109 318 ProSiteProfiles Myb-like domain profile. 129 174 IPR001005 -
Lele51g1109 318 SMART sant 126 176 IPR001005 -
Lele51g1109 318 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 127 176 IPR006447 GO:0003677
Lele51g1109 318 PANTHER TRANSCRIPTION FACTOR KUA1 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1109 Lele-ChrLele51 7275375 7276424 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele51g1109 Myb_DNA-binding 4.4e-11 CL0123