Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1106 ATGCCATTTGGATTTGTCTCAGCTTGGAACAAGAGACGTAGAACTAAGTCTCAGGATCACACAGACCCTTGGATATATAAACCTGTGGAGTTGTGGCAGATTGAAGATCAGAGGACACCACAAAGACCAACAAAGAGGAGGCATGGATCGTGTGTGTTCACACTCAAGGAGATGGAAGAGGCAACTTGTTCTTTCAGTGATGATAATTTTCTCGGAAAAGGAGGTTTCGGCAAAGTCTATAGTGGCACTTTGCGTTCTGGAGAGGTTGTAGCGATAAAGAAAATGGAGGTGCCATCGTTTAAAGAAGCAGAAGGGGAGAGAGAGTTCAGAGTGGAAGTGGACATATTGAGCAGACTGGACCATCCAAATCTTGTTTCCTTGATAGGTTATTGTGCTGATGGAAAGCACAGATTCCTGGTTTATGAGTATATGCATAATGGCAACCTCCAAGATCATTTAAATGGCATTGGTGAGACAAAAATGGATTGGCCTTCAAGACTGAAAGTGGCATTGGGGGCTGCAAGAGGACTCGCTTATCTCCATTCAAGTTCTGCCGTTGGAATTCCTATTGTTCATAGGGATTTCAAATCCACCAATGTTCTCTTAAGTTCTAACTTTGAAGCAAAGATATCAGATTTTGGGCTAGCAAAGTTAATGCCTGAAGGGCAAGAGACTCATGTCACAGCTCGAGTACTCGGTACATTTGGATACTTTGATCCAGAGTATACATCGACAGGGAAACTAACTCTACAGAGTGATGTTTACGCATTTGGTGTTGTTCTTCTTGAGCTCTTAACTGGACGCCGAGCTGTAGATCTTAACCTCGGTCCCAACGATCAAAACCTCGTCTTACAGGTGAGGCATATATTGAATGATCGGAAGAAGCTGAGGAAGGTGATAGATGCAGACATGGCGAGGAACTCATACACCATTGAATCCATAAGCATGTTTGCGAATCTTGCTTCCAGATGTGTTCGTACTGACAGTTGTGAGAGGCCTTCCATGGTGGATTGTGTTAAAGAACTTCAGCAGATTCTTTATACCAATTCAAGAGGCCTCGCTATGGTTTTGCATAGTTTCAGAATGATTTAG 1092 0.4313 MPFGFVSAWNKRRRTKSQDHTDPWIYKPVELWQIEDQRTPQRPTKRRHGSCVFTLKEMEEATCSFSDDNFLGKGGFGKVYSGTLRSGEVVAIKKMEVPSFKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGETKMDWPSRLKVALGAARGLAYLHSSSAVGIPIVHRDFKSTNVLLSSNFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNLGPNDQNLVLQVRHILNDRKKLRKVIDADMARNSYTIESISMFANLASRCVRTDSCERPSMVDCVKELQQILYTNSRGLAMVLHSFRMI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1106 363 FunFam serine/threonine-protein kinase PBS1-like 32 143 - -
Lele51g1106 363 Gene3D Phosphorylase Kinase; domain 1 31 143 - -
Lele51g1106 363 ProSiteProfiles Protein kinase domain profile. 65 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1106 363 Gene3D Transferase(Phosphotransferase) domain 1 144 355 - -
Lele51g1106 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Lele51g1106 363 Pfam Protein kinase domain 67 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1106 363 CDD STKc_IRAK 71 345 - -
Lele51g1106 363 PIRSF ILK 8 355 - -
Lele51g1106 363 FunFam receptor-like serine/threonine-protein kinase NCRK 144 354 - -
Lele51g1106 363 PANTHER OS01G0750732 PROTEIN 41 347 - -
Lele51g1106 363 SUPERFAMILY Protein kinase-like (PK-like) 44 348 IPR011009 -
Lele51g1106 363 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1106 Lele-ChrLele51 7241990 7244598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1106 48 342 Receptor kinase-like Gene Family AT3G58690 46.000 4.96e-86 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Lele51g1106 Pkinase 5.8e-49 CL0016