Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1092 ATGGAAAAGCAAAGTGTTGTGTGCGATGTTTCTTCAACATGGGAAGGTTCAGAGAGTGAACAATCCATGGAGAAGAGGCTGAAGCTATTTGGGTTTGAGTTGAATCCATGTAGCAACAATAAAACCAGTTCAAATGAAGGAGACGAAAGTGTGAACTCTTCAAACTCAGTGCTGTCTTCATCATCAGGATCTGCAGGTCAAGAGAAGATCATCGTCGTCACAGAATCATCTTCAACAGATAACCCTAATAATATTATTATCAATTCCTCAGATAATCAGAGAAAGTTTGAGTGCCAATACTGCTTCAAGGAGTTCGCAAACTCACAGGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGAATGAAGAAGAAGAGGTTTCAGCTTCAAGACAGGAAAGCTAGCCTCAATTTCTACCTTCAACAACGATCTTTTCAAACCAGTAATGATTATTATTATCAGTATTATGGATTTGGTTCTGATAATAATACTTCTTGTTGGTTCTATGATCCTTCTTCGTATAACAACTCAGCTGAGTTGTTCAATCTTCATGAAGGATCTCAGATTAGCTTCAGATCATCGTCATCAAATCATCATCATTATCATCACCGTCAACATCATCCTGGTCGTTGTCTTCAAGAGTCTTCTTGTATGTTTGATTTCTCTCGCACAGATAATAATTCTTGTAGGCCTTTCATGTTGGAGACTTCGACCCAGAAAACGAATCATAATTCTCAAAAAGCTTTGGATCTTCAACTAGGCTTAGCCTCGGAGGCGAATCCAAGAATCTAA 795 0.3862 MEKQSVVCDVSSTWEGSESEQSMEKRLKLFGFELNPCSNNKTSSNEGDESVNSSNSVLSSSSGSAGQEKIIVVTESSSTDNPNNIIINSSDNQRKFECQYCFKEFANSQALGGHQNAHKKERMKKKRFQLQDRKASLNFYLQQRSFQTSNDYYYQYYGFGSDNNTSCWFYDPSSYNNSAELFNLHEGSQISFRSSSSNHHHYHHRQHHPGRCLQESSCMFDFSRTDNNSCRPFMLETSTQKTNHNSQKALDLQLGLASEANPRI 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1092 264 PANTHER ZINC FINGER PROTEIN 5 5 259 IPR044299 GO:0010090
Lele51g1092 264 SUPERFAMILY beta-beta-alpha zinc fingers 92 123 IPR036236 -
Lele51g1092 264 MobiDBLite consensus disorder prediction 1 18 - -
Lele51g1092 264 MobiDBLite consensus disorder prediction 1 21 - -
Lele51g1092 264 ProSitePatterns Zinc finger C2H2 type domain signature. 98 118 IPR013087 -
Lele51g1092 264 MobiDBLite consensus disorder prediction 40 62 - -
Lele51g1092 264 Gene3D Classic Zinc Finger 75 151 - -
Lele51g1092 264 ProSiteProfiles Zinc finger C2H2 type domain profile. 96 123 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1092 Lele-ChrLele51 7110825 7111619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1092 19 139 C2H2 Transcription Factor Family AT1G68360 42.623 5.59e-17 76.3