Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1081 ATGAATCCCTTCTCTTCAGGGACGAGCTTGAGGGACATGATTCGGGCCATACGTGCCTGCAAGACAGCAGCAGAAGAACGTGCTGTTGTGAGAAAAGAGTGTGCCGCCATTCGTGCTGCCATTGATGAAAATGATCAAGACTATAGGCACAGGAATCTGGCTAAGCTTATGTTCATACACATGCTTGGCTACCCAACACATTTTGGTCAAATGGAATGCCTCAAGTCGATTGCTTCTCCCGGATTTCCTGAGAAGAGAATAGGTTATCTTGGCCTTATGTTGCTTCTTGATGAAAGACAAGAGGTTCTGATGTTGGTCACAAACTCCTTGAAACAAGATCTTAATCATACAAATCAGTATATTGTAGGACTTGCGCTTTGTGCTTTAGGAAACATTTGTTCAGCAGATATGGCTCGTGATCTTGCACCAGAGGTTGAGAGGTTGCTGCAATTTCGAGACCCAAATGTCCAGAAAAAGGCAGCATTATGCTCAATAAGAATCATAAAGAAAGTTCCGGACTTGGCAGAAAATTTTATTAATTCTGCTGCTGCGTTACTTAGGGGGAAGCATCACGGAGTTTTGATCACTGGGGTTCAGCTCTGTACAGAACTGTGTAAAGTTAGCGCAGAAGCCCTTGAATACTTTAGAATGCAATGCACTGAGGGTGTGGCCAGAAGTCTCAAGGACCTAGTCAACAGTCCTTATGCACCAGAGTATGACATTTCTGGCATCACCGATCCTTTCCTCCATATTAGATTGCTCAAGCTTTTGCGAGTACTAGGTGAAGGCGATGCTGATGCTAGTGACTTAATGAATGACATACTTGCGCAGGTGGCTACCAAGACTGAGTCAAATAAAGTTGCAGGAAATGCCATTTTATATGAATGTGTTCAAACAATCATGAGTGTTGAAGATAGTGGTGGCCTACGTGTGCTTGCCATCAATATCCTTGGAAGATTCTTGTCAAATCGTGACAACAATATTAGGTATGTGGCATTAAACATGCTGATGAAGGCTGTAACAGCTGATGCTCAGGCAGTGCAGAGGCATCGTGCAACTATTCTGGAATGTGTAAAGGATTCAGATGCTTCAATTCAGAAAAGAGCTCTTGAACTTGTTTACATTTTGGTGAATGAAAGTAATGTGAAGCCCTTAACAAAAGAGCTAATTGATTTTCTGGAAGTCAGTGATCAAGAATTCAGACCTGACCTTACTGCCAAAATTTGCTCTATAGTTGCCAAGTTTTCTCCAGAGAAGATCTGGTACATTGATCAGATGCTCAAGGTTCTTTCTGAGGCTGGAAACTTTGTAAAAGATGAAGTATGGCATGCACTAATTGTTGTTATAAGCAATGCTTATGACCTCCATGGCTACACAGTGAGATCATTATACAGAGCATTGCAAACTTCCGCTGAACAGGAAAGTCTCGTTCGAGTTGCAGTGTGGTGCATTGGAGAATATGGAGATATTTTAGTTAAGAATGTTGGAATGCTTGACATAGAAGATCCAATAGTGGTGATTGAATCAGATGCTGTGGATATTCTAGAGATGGCTATAAAACGACATGCATCGGATCTTACCACAAGAGCGATGGCTTTGATGGCCCTGTTGAAACTTAGTTCACGTTTTGCATCTTGTTCAGAGAGGATCAGGAATATAATTATTCAGTATAAAGGAAACCTGGTGCTTGAATTGCAGCAAAGATCTATAGAATTCAATAAAATTCTTGCAAATCATCAAAATATTAGTTCTACACTTGTAGAAAGGATGCCAGTTTTAGATGAGGCAACTTTTGTTGGTAGGAAGTCTGGTTCTATGCCAGGCACAGCTTCAACTTCAACAGGACCTTTCCTTAATATTCCAAATGGGGTTGCCAAACCTTCTTTGGCTCCTCTTGTAGATCTGCTTGATTTAAGCTCAGATGATGTTCCTGCACCTAGCTCCTCTGGTGGTGATCTTCTTCAAGACCTTCTTGGTGTTGATCTGCCACTAGCATCACAACTGCTGGGTCCTGGTCAAGCTCCAAAAAGTGGTACCGACATTCTTTTGGATCTTTTGTCTGTTGGATCACCTTCTGTGGCTACTATGTCACCTTCTGCACAAAGCCTTTCATCTACAACAGACATCTTATCCTCTGGTATGAATAAAAAAGCATTAGTTTCACCACTGGATGATCTCACGTCTCTCTCACTTTCTGAAAGAGCAACTTCTAATGCTGGTGCTGCTCCTATGATGGATTTGTTGGATGGCTTGACCCCCAGCCCTCCAACAGAAAACAGTGGACCAGCTTATCCATCTATAACTGCATTTGAGAGCAGCTCCTTGAGGGTGACATTCAATTTCTCCAAAGAACCAGGAAAACCACAAACAACAATTATTCAAGCTACCTTTGCCAATTTGACTTCTAGGACATATACAGATTTTGTTTTCCAGGCGGCAGTTCCTAAGTTTCTTCAATTGCACTTAGATCCGGCTAGTGGCAATGCTCTGCCTGCTACCGGTGATGGGCCCATCACACAGAATCTTAGAGTTACTAACACCCAGCATGGAAAGAAAAATCTTGTCATGCGTATAAGGATGGCGTACAAGATAAATGGCAAGGATACACTAGAAGAAGGACAAATCAATAATTTTCCTCGTGAATTATGA 2649 0.4198 MNPFSSGTSLRDMIRAIRACKTAAEERAVVRKECAAIRAAIDENDQDYRHRNLAKLMFIHMLGYPTHFGQMECLKSIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSADMARDLAPEVERLLQFRDPNVQKKAALCSIRIIKKVPDLAENFINSAAALLRGKHHGVLITGVQLCTELCKVSAEALEYFRMQCTEGVARSLKDLVNSPYAPEYDISGITDPFLHIRLLKLLRVLGEGDADASDLMNDILAQVATKTESNKVAGNAILYECVQTIMSVEDSGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAVTADAQAVQRHRATILECVKDSDASIQKRALELVYILVNESNVKPLTKELIDFLEVSDQEFRPDLTAKICSIVAKFSPEKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNAYDLHGYTVRSLYRALQTSAEQESLVRVAVWCIGEYGDILVKNVGMLDIEDPIVVIESDAVDILEMAIKRHASDLTTRAMALMALLKLSSRFASCSERIRNIIIQYKGNLVLELQQRSIEFNKILANHQNISSTLVERMPVLDEATFVGRKSGSMPGTASTSTGPFLNIPNGVAKPSLAPLVDLLDLSSDDVPAPSSSGGDLLQDLLGVDLPLASQLLGPGQAPKSGTDILLDLLSVGSPSVATMSPSAQSLSSTTDILSSGMNKKALVSPLDDLTSLSLSERATSNAGAAPMMDLLDGLTPSPPTENSGPAYPSITAFESSSLRVTFNFSKEPGKPQTTIIQATFANLTSRTYTDFVFQAAVPKFLQLHLDPASGNALPATGDGPITQNLRVTNTQHGKKNLVMRIRMAYKINGKDTLEEGQINNFPREL 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1081 882 FunFam AP-1 complex subunit gamma 752 882 - -
Lele51g1081 882 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 762 879 IPR008153 -
Lele51g1081 882 PIRSF AP1_gamma 6 882 IPR017107 GO:0005794|GO:0016192|GO:0030121
Lele51g1081 882 FunFam AP-1 complex subunit gamma 2 594 - -
Lele51g1081 882 Pfam Adaptin C-terminal domain 765 879 IPR008152 GO:0006886|GO:0016192
Lele51g1081 882 Gene3D - 748 881 - -
Lele51g1081 882 SUPERFAMILY ARM repeat 25 593 IPR016024 -
Lele51g1081 882 SMART alpha_adaptinc2 759 879 IPR008152 GO:0006886|GO:0016192
Lele51g1081 882 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 11 870 - -
Lele51g1081 882 Gene3D - 2 594 IPR011989 -
Lele51g1081 882 Pfam Adaptin N terminal region 27 578 IPR002553 GO:0006886|GO:0016192|GO:0030117
Lele51g1081 882 SUPERFAMILY Clathrin adaptor appendage domain 740 880 IPR013041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1081 Lele-ChrLele51 6986263 6998566 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1081 51 6986263 6998566 Lele53g0943 53 19049987 19051536 CCT
Lele51g1081 51 6986263 6998566 Lele54g0924 54 15701206 15702746 CCT
Lele51g1081 51 6986263 6998566 Lele55g0530 55 3421353 3424640 CCT
Lele51g1081 51 6986263 6998566 Lele56g0517 56 3782881 3784437 CCT
Lele53g0947 53 19081400 19084984 Lele51g1081 51 6986263 6998566 CCT
Lele54g0927 54 15726146 15728792 Lele51g1081 51 6986263 6998566 CCT
Lele55g0526 55 3388473 3391606 Lele51g1081 51 6986263 6998566 CCT
Lele56g0514 56 3756412 3758970 Lele51g1081 51 6986263 6998566 CCT
Lele51g1081 51 6986263 6998566 Lele51g1081 51 6986263 6998566 ECH
Lele49g1067 49 6891500 6903570 Lele51g1081 51 6986263 6998566 hybridization
Lele50g1155 50 7756382 7775005 Lele51g1081 51 6986263 6998566 hybridization