Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1056 ATGCCGAATCGAGGTAGGCTTAGATTGGCCGATCGTTCTCGGAATCGCGTTGGGAGATTTCTGATCTTAGAATCAGAAATGGCTTCCAGAAGCTCCAACGTCGATTCTAGTTCGAAATCAAACGGGATTTCTTTTTCTTCTGAATTGTCGACCGACGATGAGGCTCCATTGCCAGATTCTCCGTCGTCGTCCAATAGTACGAATTCTACGCCTCAAATTTCTCCATCTACCTCGCCGCCGTCGGGTTCTCCTCCTCCGACGAGTTCTCCACCGCCACCATCAAGGCCACCTCGGTCGCCGCCACCATCAAGACCGCCTCGGTCGCCGCCACCATCAAGGCCGCCTAGGTCGCCGCCACCACCACCATCTTCTTCGCCCTCTTCACCCCCTCCATTGTCACCGCCTCCATCACCACCACAGTCTTCGCCACCTCCATCTCTGTCTCCTCCCCCTAAACGGTCCCAACCACCATCGTCTCCTCCCCCTAGACACTCACCACCACCATCGTCTCCTCCCCCTAAACAGTCACCACCACCATCGTCTCCTCCCCCAAAGTCATCGTCACCTCCACCACAATCACAATCTCCTCCTCCTCCGGGATCCCCCAGTAATTCGTCAGCCACCGGCAACCTACCACCACCACCTCCTTCAACTACTGTTTCCCCTCCAGTTGCCACTGCCCAACCAAGTACACCCAGCTCTGTTCCGCCACCAAGGGCGTGGGGCCCTCCTCCTCCGCCGCAGTCACCTTCCACCACAAGCTCAAGCGGTTCTTCGGGTGGATCCACGTCGCCCTCGTCGTCAAGACGTAGCCGCAGTGGTGGTGGTTCAGACAATTACATTGGTTATGCTGTTGCCGGAGTGCTCGGTTTTATCCTGCTCGCCATATTTATTGTTTTCGTGGTAAGGAGGAAGAGAAAACGAAAAGTGGCCCATGCTACACATTTTGGCGCTGCCAATAACTTATATAAGAAACCAGGCACGGAAGGATTTTACTATGCTCAGCAGCCTGGGAAAGCGAATTATGCACAAGAGGGCTTTTATACTTCCCAAGCTCCAACCTCTCCCAACAATAAAACTGGGAATCAAGCAGGTGCTGTGCAACATTTTGGGAGTTCAGACTCGCCCTGGGGTAATGGTCAAATATCTTTTAGCTATGAGCAGATTACGGAGATAACTCGAAGATTTTCTAGTGAAAATATTATAGGGGAGGGGGGATTTGGACATGTGTACAAGGGTTGGCTTTCAGATGGAAAAGAAGTGGCTGTGAAGCAGCTTAAGGCTGGTAGCGGCCAAGCCAGAGGAGTTAAAGTCTTAGATTGGGACAAGAGGATGAAGATTGCAATTGGCTCCGCAAAAGGCTTAGCATATTTGCATGAAGACTGCAACCCAAAAATTATCCACAGAGATATTAAGTCAGCGAACATACTTTTGGATAATGCGTTTGAGGCACAGGCTCGTCCACTTCTCCATCGCGCTATTGAGACCCGAGACTTCAGTGAATTAGTGGACAAAAGGCTTAACATGCAATTTGTGGAGAGCGAGATGTACACAATGATTGAAGCTGCCGCAGCTTGTGTTCGCCACTCTGCTCCAAAACGGCCTCGTATGATTCAGGTGGTAAGAGCATTGGATAGTCAAGATGAGTCATGTGATTTATCAAATGGGGTTAAATATGGTCAGAGCACTATTTATGATGCCGGCCACTACAGTGAAGAAGCTATTATGAGATTCAGGAAGATGGCCATTGATAGCTGTAGTGAATCTGAATTTGATAGGGACAGTGGAGATTTATCTTCTCCAGTAGAGGTTTCTGGACAACAACATTCATGGCTCAAGGGTGCTTCAAGTGGCGAGTCAGAGACCCGGGCTTTCAATGCAAGTAGAAGGACTTAG 1896 0.5032 MPNRGRLRLADRSRNRVGRFLILESEMASRSSNVDSSSKSNGISFSSELSTDDEAPLPDSPSSSNSTNSTPQISPSTSPPSGSPPPTSSPPPPSRPPRSPPPSRPPRSPPPSRPPRSPPPPPSSSPSSPPPLSPPPSPPQSSPPPSLSPPPKRSQPPSSPPPRHSPPPSSPPPKQSPPPSSPPPKSSSPPPQSQSPPPPGSPSNSSATGNLPPPPPSTTVSPPVATAQPSTPSSVPPPRAWGPPPPPQSPSTTSSSGSSGGSTSPSSSRRSRSGGGSDNYIGYAVAGVLGFILLAIFIVFVVRRKRKRKVAHATHFGAANNLYKKPGTEGFYYAQQPGKANYAQEGFYTSQAPTSPNNKTGNQAGAVQHFGSSDSPWGNGQISFSYEQITEITRRFSSENIIGEGGFGHVYKGWLSDGKEVAVKQLKAGSGQARGVKVLDWDKRMKIAIGSAKGLAYLHEDCNPKIIHRDIKSANILLDNAFEAQARPLLHRAIETRDFSELVDKRLNMQFVESEMYTMIEAAAACVRHSAPKRPRMIQVVRALDSQDESCDLSNGVKYGQSTIYDAGHYSEEAIMRFRKMAIDSCSESEFDRDSGDLSSPVEVSGQQHSWLKGASSGESETRAFNASRRT 631
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1056 631 MobiDBLite consensus disorder prediction 252 275 - -
Lele51g1056 631 MobiDBLite consensus disorder prediction 77 222 - -
Lele51g1056 631 ProSiteProfiles Protein kinase domain profile. 278 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1056 631 MobiDBLite consensus disorder prediction 229 251 - -
Lele51g1056 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Lele51g1056 631 Gene3D Transferase(Phosphotransferase) domain 1 382 433 - -
Lele51g1056 631 Gene3D Transferase(Phosphotransferase) domain 1 485 556 - -
Lele51g1056 631 MobiDBLite consensus disorder prediction 26 76 - -
Lele51g1056 631 MobiDBLite consensus disorder prediction 24 275 - -
Lele51g1056 631 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 435 485 - -
Lele51g1056 631 SMART tyrkin_6 396 544 IPR020635 GO:0004713|GO:0006468
Lele51g1056 631 PRINTS Proline rich extensin signature 80 96 - -
Lele51g1056 631 PRINTS Proline rich extensin signature 98 115 - -
Lele51g1056 631 PRINTS Proline rich extensin signature 59 80 - -
Lele51g1056 631 PRINTS Proline rich extensin signature 118 143 - -
Lele51g1056 631 SUPERFAMILY Protein kinase-like (PK-like) 384 545 IPR011009 -
Lele51g1056 631 ProSitePatterns Protein kinases ATP-binding region signature. 402 424 IPR017441 GO:0005524
Lele51g1056 631 Gene3D Transferase(Phosphotransferase) domain 1 434 484 - -
Lele51g1056 631 MobiDBLite consensus disorder prediction 590 631 - -
Lele51g1056 631 MobiDBLite consensus disorder prediction 600 624 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele51g1056 Lele-ChrLele51 6770233 6774917 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1056 281 486 Trihelix Transcription Factor Family AT1G23540 42.322 1.86e-52 187
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele51g1056 None None None