Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1055 ATGCCAGGCTTGGAGCTAGCAGCAGCAGTGGAGGAATTCAGAACCTTGACTGAGACTAAAGCTTGGGACTATGTTGTAGTATGGGAGTATGGCGATGACCCCTCAAGATTTATCGAGTGCATGGGTTGTGGTTGTGTTGGGGGATGTAAAGGAAGCAAGAACGAAGAGGAAAAGGAGGACGAATACAGATTGAGTCCTAAATGTAGGGATGATCACTTTCAGCATCCAGTGAGAACAAAGGCTTGTGAGGCTCTTGCTCTGCTTCCTTATACAATGCCACTTTATTCTGGAGCTCTTCTCATCAGAGATTGTTTGGATTTCCAGTGTGGCACTCTGGAAGAAGATAAACCAGAGTTGGTCGAGAAACCTCAAAGGGAAGGCTATACATCTAAAAATCTTGTCACAGAGAGGAATAGGAGGAACAAGATCACAGATGGGCTTTACGCCCTACGAGCTTTGGTCCCTAAGATAACCAAGATGTATAGGGCATCTATTGTTGGAGATGCCATTGATTATATAAAGGAACTGCAGGAACAAGAAAAAGGACTTGGAGAAGAGATGAGAGCCTTGGAAGAAGAGGACTATGAAAAGAACAAACCACAGAGGAGGAGGCCAATGTTGAAGTAA 627 0.445 MPGLELAAAVEEFRTLTETKAWDYVVVWEYGDDPSRFIECMGCGCVGGCKGSKNEEEKEDEYRLSPKCRDDHFQHPVRTKACEALALLPYTMPLYSGALLIRDCLDFQCGTLEEDKPELVEKPQREGYTSKNLVTERNRRNKITDGLYALRALVPKITKMYRASIVGDAIDYIKELQEQEKGLGEEMRALEEEDYEKNKPQRRRPMLK 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1055 208 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 122 192 - -
Lele51g1055 208 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 128 193 IPR036638 GO:0046983
Lele51g1055 208 SMART finulus 133 182 IPR011598 GO:0046983
Lele51g1055 208 Coils Coil 173 193 - -
Lele51g1055 208 Pfam Helix-loop-helix DNA-binding domain 135 177 IPR011598 GO:0046983
Lele51g1055 208 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 127 176 IPR011598 GO:0046983
Lele51g1055 208 MobiDBLite consensus disorder prediction 184 208 - -
Lele51g1055 208 Gene3D - 120 194 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1055 Lele-ChrLele51 6767697 6769199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1055 130 201 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 55.556 2.06e-18 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele51g1055 HLH 2.6e-09 No_clan