Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1036 ATGGGAATAATCATCGGTTCGATTTTCTGGCTTCTGGGTTTGTTGTTACTTCTTCTGGCTTTCACAGAGATTTCTTCTGCCGCTCTTTCTCCTTCTGGGGTAAACTATGAAGTTGTTGCTCTGATTGCCATAAAGAATGACTTGGTTGATCCCCACAATGTTTTGGATAGTTGGGATATTAATTCTGTCGACCCCTGTAGCTGGAGGATGGTTACTTGTTCTTCAGATGGCTACGTGTCTGCTTTAGGATTGCCTAGTCAGAACTTGTCTGGTACACTGTCTCCTGGAATCCAAAACCTATCAAACTTGCAGTCTGTGTTGCTTCAAAACAATGGCATTTCTGGTTCAATTCCTGCAGGGATAGGAAATCTGGAAAAGCTTCAGACACTTGATCTTTCCAATAATGCATTTAGTGGTGAGATACCCAGTTCTTTGGGAGGGCTAGAGAACCTGAATTATCTGCGATTAAACAATAACAGCTTGAAAGGAGTCTGCCCTCAGTCCCTTGGCAACATTGAAGGCCTAACCCTTGTGGACCTCTCTTATAACAATCTGAGTGGTCCGTTGCCAAGAATATCTGCAAGAACATTCAAGATTGTGGGTAACCCTTTGATTTGTGGTCCAACTGCTAATAACTGTTCAATGGTTTTGCCGGAGCCCCTTTCCTTCCCTCCAGATGCTATGAGAGCCCAATCAAACTCTGTAACAAAAAGCCAACGTGTAGCAATTGCTTTTGGAGCAAGTTTTGGTGGTGCTTTTGTTGTCATGATTATTATCGGGTTCCTTGTTTGGTGTCGATATAGACACAACCAGCAGATATTCTTTGATGTTAATGAGCAATATGATCCAGAGGTGCGCCTTGGTCATTTGAAAAGATACTCATTCAAAGAACTTCGAGCTGGAACAGCCCATTTCAGTTCAAAGAACATTCTAGGAAGAGGTGGCTTTGGAATAGTCTACAAAGGGCTCTTGAATGATGGATCTATAGTGGCAGTGAAAAGGTTAAAGGACTATAATGCTGCCGCTGGAGAAATCCAATTTCAGACCGAAGTTGAGACAATAAGTTTAGCCGTCCACCGGAATCTTCTCAGGCTTTGTGGGTTTTGCAGCACTCAGAATGAAAGGCTCCTTGTTTATCCATACATGCCTAATGGCAGCGTAGCCTCTCGATTAAAAGATCATATTCGTGGTCACAAGGCCTTGGATTTTGGACGAGCTACTAACCAGAAAGGTGTAATGCTTGATTGGGTTAAGAATCTCCATCAAGAACGAAGATTAACTCAAATGGTGGATAAGGATTTGAATGGAGAGTTTGACTTGATTGAACTGGAAGAAATGGTTCAGGTTGCACTATTGTGTACACAGTTTAATCCTCATCAACGTCCCAAGATGTCTGAAGTATTGAAGATGTTGGAAGGCGATGGTTTAGCAGAGAGATGGGAGGTTTCACAGAAGCTTGATACATCAAAGTTTCAGAGCAGTGAAAACCCTACTCCTCAGAGATATTCAGATTTTATAGAAGATTCTTCACTCATAGTAGAAGCTATGGAGCTTTCTGGGCCTAGGTGA 1569 0.4238 MGIIIGSIFWLLGLLLLLLAFTEISSAALSPSGVNYEVVALIAIKNDLVDPHNVLDSWDINSVDPCSWRMVTCSSDGYVSALGLPSQNLSGTLSPGIQNLSNLQSVLLQNNGISGSIPAGIGNLEKLQTLDLSNNAFSGEIPSSLGGLENLNYLRLNNNSLKGVCPQSLGNIEGLTLVDLSYNNLSGPLPRISARTFKIVGNPLICGPTANNCSMVLPEPLSFPPDAMRAQSNSVTKSQRVAIAFGASFGGAFVVMIIIGFLVWCRYRHNQQIFFDVNEQYDPEVRLGHLKRYSFKELRAGTAHFSSKNILGRGGFGIVYKGLLNDGSIVAVKRLKDYNAAAGEIQFQTEVETISLAVHRNLLRLCGFCSTQNERLLVYPYMPNGSVASRLKDHIRGHKALDFGRATNQKGVMLDWVKNLHQERRLTQMVDKDLNGEFDLIELEEMVQVALLCTQFNPHQRPKMSEVLKMLEGDGLAERWEVSQKLDTSKFQSSENPTPQRYSDFIEDSSLIVEAMELSGPR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1036 522 FunFam Somatic embryogenesis receptor kinase 1 274 381 - -
Lele51g1036 522 ProSiteProfiles Protein kinase domain profile. 305 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1036 522 Gene3D Phosphorylase Kinase; domain 1 274 381 - -
Lele51g1036 522 Gene3D Transferase(Phosphotransferase) domain 1 391 491 - -
Lele51g1036 522 FunFam Putative LRR receptor-like serine/threonine-protein kinase 34 215 - -
Lele51g1036 522 SUPERFAMILY Protein kinase-like (PK-like) 277 471 IPR011009 -
Lele51g1036 522 Pfam Protein kinase domain 306 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1036 522 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Lele51g1036 522 SMART LRR_typ_2 100 123 IPR003591 -
Lele51g1036 522 SMART LRR_typ_2 148 171 IPR003591 -
Lele51g1036 522 SMART LRR_typ_2 124 147 IPR003591 -
Lele51g1036 522 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 395 481 - -
Lele51g1036 522 SUPERFAMILY L domain-like 35 196 - -
Lele51g1036 522 Gene3D Ribonuclease Inhibitor 34 215 IPR032675 -
Lele51g1036 522 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Lele51g1036 522 Pfam Leucine rich repeat 101 161 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1036 Lele-ChrLele51 6618754 6622240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1036 395 522 Receptor kinase-like Gene Family AT5G16000 59.701 7.11e-44 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele51g1036 Pkinase 1.7e-13 CL0016