Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1033 ATGTTCACAGCCTTCTCGGTGTTAATACTGGGACAAGACCTGCCGGACGGGAACTACTACGGACTGAAAAAATCAGGAGAGAAGGCGAACGACGATTTTTCTAGGGTTTTATACCACGGCGTCAAGAATTACAGAGGATGGATTTTAGGGTTGACGTATGGGTTTAACCTGAAGCTTCACACGGCCGGCATGGTGGCTGCCAGCTTCGGTCTGGCGAACGCGTTTTCGCGGCCAGCTGGAGGGTTTTTATCGGATTCAATGGCAAGGAGGTTTGGGATGAGAGGTAGGTTATGGGCGTTGTGGCTCTGTGAAACGTTGGGAGGAATTTTCTGCATAATACTTGGCCTTGTAGGGTCTTTAGAAGCTTCCATCGTTGTTATGATCATATTCTGTGTGTTCGTTCAAGCTGCTTGTGGACTCACTTTTGGAGTTTGCCATTTGTCTCAAGAAGAATGTGTCATTCTCAAGAGTGCAAGTGCAAGATGTGAAGAGTCCAATACAACTGTGACAAGCAGGTGCAAGAACCAGACAGGAACAGTGGTGATTTCTGGGGTGAAGTTTGATAGAATTTATGGGACTTGTGCATTTCAACCAATACATATAGCATGTAGCAATTCAATACCTTGCACTGATGTTGATCTAACTGATATTCAGCTGAGGCCATCACTGAATTATACAGGTTTTCAAGAAGCTTTGTGTTATAACTCTTATGGGAAATCTCAGGCACCGTATTGCCTTCGAGCATTGACTATTGCTTGA 759 0.4493 MFTAFSVLILGQDLPDGNYYGLKKSGEKANDDFSRVLYHGVKNYRGWILGLTYGFNLKLHTAGMVAASFGLANAFSRPAGGFLSDSMARRFGMRGRLWALWLCETLGGIFCIILGLVGSLEASIVVMIIFCVFVQAACGLTFGVCHLSQEECVILKSASARCEESNTTVTSRCKNQTGTVVISGVKFDRIYGTCAFQPIHIACSNSIPCTDVDLTDIQLRPSLNYTGFQEALCYNSYGKSQAPYCLRALTIA 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1033 252 SUPERFAMILY MFS general substrate transporter 46 144 IPR036259 -
Lele51g1033 252 Gene3D - 153 249 IPR012334 -
Lele51g1033 252 Pfam Glycosyl hydrolases family 28 171 221 IPR000743 GO:0004650|GO:0005975
Lele51g1033 252 Gene3D MFS general substrate transporter like domains 36 152 IPR036259 -
Lele51g1033 252 SUPERFAMILY Pectin lyase-like 172 242 IPR011050 -
Lele51g1033 252 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 2 56 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1033 Lele-ChrLele51 6564021 6568868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1033 3 144 Inorganic Solute Cotransporters AT1G12940 56.173 1.41e-58 192