Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1013 ATGGCAGGACCCTCCATACCTCCTAAATCCTCCCTCAAGTTACTCTGCAGCTACGGCGGAAAAATCCTTCCCCGTTATCCCGACGGCAAGCTCCGCTATATCGGTGGCCATACACGTGTACTCTCCGTCGACCGCTCTATTTCCTTTTCCGAGCTTTTGGTGAAGTTGAGAGAGCTATGTGGCTTGGAAGCTGTGACAGTTCGCTGTCAATTGCCTACCGAAGATCTCGATGCTTTGGTATCCATCAGCTCCGACGAAGATCTGGCGAATCTGATCGAGGAATACGATGTTGTTGCGCCGCCCTCATCTTTAAAGATTAGAGCGTTCCTTTTGCCGCCGAAATCGTTCCAGAAAAAAGATTCAATTCCGTCCTCGTCGTCTATGTCAAAATCGTCGTCGTCATCATCTACGTCGTCGTCGTCGTCACCTCACAATTCTACTGCTGGTAGCTGTGGATGTTCTACTTGTGGCGGCAGCCCGAGGTACTCGGTGTTGGTGACTCCGGTTGTCGATCGATGTGTGCGTCAGATGTCGGCGCCGATAGCGTATGACATGAGAAAATCTGCCGGGAGGAATATTCCTCTTCCTCACCTTGCTTACCAGACTCAGAAATCCAGGCCACATTTGCGTCATCCACAACGGGAACCACTGGCAATAGAGCCAGACTGA 669 0.5127 MAGPSIPPKSSLKLLCSYGGKILPRYPDGKLRYIGGHTRVLSVDRSISFSELLVKLRELCGLEAVTVRCQLPTEDLDALVSISSDEDLANLIEEYDVVAPPSSLKIRAFLLPPKSFQKKDSIPSSSSMSKSSSSSSTSSSSSPHNSTAGSCGCSTCGGSPRYSVLVTPVVDRCVRQMSAPIAYDMRKSAGRNIPLPHLAYQTQKSRPHLRHPQREPLAIEPD 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1013 222 SUPERFAMILY CAD & PB1 domains 28 117 - -
Lele51g1013 222 MobiDBLite consensus disorder prediction 118 150 - -
Lele51g1013 222 PANTHER OS05G0427100 PROTEIN-RELATED 7 192 - -
Lele51g1013 222 SMART PB1_new 26 111 IPR000270 GO:0005515
Lele51g1013 222 Gene3D - 30 110 - -
Lele51g1013 222 Pfam PB1 domain 28 109 IPR000270 GO:0005515
Lele51g1013 222 MobiDBLite consensus disorder prediction 199 222 - -
Lele51g1013 222 MobiDBLite consensus disorder prediction 117 150 - -
Lele51g1013 222 CDD PB1_UP2 15 110 - -
Lele51g1013 222 MobiDBLite consensus disorder prediction 208 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1013 Lele-ChrLele51 6412654 6413494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1013 13 111 MAP Kinase Kinase Kinase AT2G35050 54.545 4.21e-29 112