Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1011 ATGGAAGAAGCTTTCAGGCGTCTCAACGGCCTCGATTCCAACAACTCCTTCTCCGATCACAACCACCACAAGAAGTGCGCCTCCGCCGCCAACAAGAGGTGTTCGAGAGATAACAGCGCCCCCGGCGCTATGAGGTACCGTGGAGTTAGGCGTAGGCCCTGGGGCCGTTACGCCTCCGAGATAAGGGACCCTCTGTCGAAAGAGCGGCGTTGGCTTGGCACCTTTGACACGGCGGAGGAAGCCGCTTGTGCCTACGACTGCGCCGCCCGAGCCATGCGTGGCCTTAAAGCTCGTACCAACTTCGTCTACCCAACTTCCGCTTCTCCTTACTCTGTTCCTTACAATCTCTTACCTCCTTCCTTCAACTTCCCCAAACAATCTCAGACTTCGTCCGTTAATATTAACAAGAACATCCATAACGACCCCCATGTGGGAGCTTCTAGTTGGTCCAACCCTCGTACCTGTACTTCAACCCACCGAAACTCCATGATTAAGCACCCTGATGTTCTCAATCCTTATGTGGTTCCTTCTCCTTCACCATCATCGTCGTCCACCTGTCCCACGTGTACTTGTCTCCAAGGTTGCTGTCCAATGAACTCTTCTTGCGGCACCAATACTGCTACTAATAGTAGCACGTGTGGGTCTGCTTCCGTCTCGATGACCACAAGCCATAATCATAACGGAATAATACTAAAGAACGATTGTGAAGAAGCTGAAGATGGATTTGCGTTCTTTCCAAGAGAAGCTTCAGACTCGGGGTTGTTGGAGGAGATAGTTCATAAATTTATGTTAACTTCTAAGCCCAAGAAATTTGAGAAGTCTCCCCACGATTTCCTCCCTCCCAGTCAGACTCAGTCTCAGTCTGTTCCTGATCCTACGTTCGTTTCTGCTCCTCAGTGCTATTACGAAACCCAGAAAGAGGGTTTTGGTGTGTATTTGGACGATGGCCAAGGTTTTGTTCCCATGCAGCAGCAGCAGCAGCAACAGTTTGAGGGTTTTGATGAGCAGGCTATGCATTTCGGCAACAACGGTGTTCAGTTGATGAATAACCAAGCAGATTTCTCAATCACGCAAGATCTTGTTCGTTATCAAGAGATTCTTAATGCCTTTGCATCCAGAGTCCACAATGCGTAA 1134 0.4938 MEEAFRRLNGLDSNNSFSDHNHHKKCASAANKRCSRDNSAPGAMRYRGVRRRPWGRYASEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSASPYSVPYNLLPPSFNFPKQSQTSSVNINKNIHNDPHVGASSWSNPRTCTSTHRNSMIKHPDVLNPYVVPSPSPSSSSTCPTCTCLQGCCPMNSSCGTNTATNSSTCGSASVSMTTSHNHNGIILKNDCEEAEDGFAFFPREASDSGLLEEIVHKFMLTSKPKKFEKSPHDFLPPSQTQSQSVPDPTFVSAPQCYYETQKEGFGVYLDDGQGFVPMQQQQQQQFEGFDEQAMHFGNNGVQLMNNQADFSITQDLVRYQEILNAFASRVHNA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1011 377 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Lele51g1011 377 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Lele51g1011 377 Pfam AP2 domain 45 94 IPR001471 GO:0003700|GO:0006355
Lele51g1011 377 Gene3D AP2/ERF domain 44 103 IPR036955 GO:0003700|GO:0006355
Lele51g1011 377 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Lele51g1011 377 MobiDBLite consensus disorder prediction 1 23 - -
Lele51g1011 377 FunFam Ethylene-responsive transcription factor 2 44 103 - -
Lele51g1011 377 CDD AP2 45 101 IPR001471 GO:0003700|GO:0006355
Lele51g1011 377 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Lele51g1011 377 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 29 221 - -
Lele51g1011 377 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1011 Lele-ChrLele51 6395982 6397115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1011 1 104 AP2-EREBP Transcription Factor Family AT1G24590 58.400 2.41e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele51g1011 AP2 5.5e-11 CL0081