Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0996 ATGGACACATATATCTTGATTCTCATTTTCCTCAGCGTATGTCTCTCTCCTGTTAGGCCCGTCCTTTTTGCTTTTGTTTCCCTCAAAGATACCAAAAGCTGCTTATGTAGGCAATCCTTTCTTTTTTGGCCTTTGCTTTCTTCCGATTTCCTCGTCTTTTTTAGTTTTGCTAGTTCGAATAAGGTGAATCTAATGGCGAGGGAGAGGATTCAGATTAAGAAGATCGACAACGCTACCGCAAGGCAAGTGACGTTCTCCAAGCGACGCAGAGGGCTCTTCAAAAAAGCTGAGGAGCTTTCTGTCCTCTGTGATGCAGATGTGGGCCTCATAGTCTTCTCCGCAACTGGGAAGCTCTTTGAGTACTCCAGCACAAGCATGAAGGAAATACTCAACAGGTATCATTTGCACTCGAAGAACCTATCCAACCAAGAACAACCGTCTGTTGAATTGCAGCTAGTTGAGAACAGTAATTACACCAGTTTGAGCAAGGAAGTTGCTGAGAAGAGCCGTCAACTAAGGCGGATGAGAGGAGAAGATCTGCAAGGTTTAAATATCGAGGAATTGCAGCAACTAGAGAGGTCTCTCGAATCTGGATTGGGTCGTGTAATAGAAAAGAAGGAAGAGAAGATAATGACTGAGATCAGTGATCTCGAGAGAAAGGGAGTGGAGTTGATGGAAGAGAATGAGATGTTAAAGCGTCAAGTGGAACAATTATCTGATGGCAATAGGCATGGTGGTGCCGAGTCCGAAATCGTCAACAATGAGGAGGGTCAGTCATCAGAATCTGTCACTATCGTCTGCAACTCCCCGGGACCCCCTCAAGACTACGATAGCTCAGACACATCGCTCAAGCTGGGAAAATGTTTTCCCCCAGTTTGGTCAATAAACGTCACATGTATTGGAATTGATATTTCAAGCGGGCTGCAGACAGGGGATTCGTACATAGCTAAAATGGAATTGTCATCGCTGTGGAATTGGATCGGCTATCTTCGTGTTCATGGATCATCCAGTGTAGAAGGTGAAGCAAGGGGACATGGTCAATGTGTTGTATTGCAGAGTTTGGAAGTGTCGTCCATGCGACAAAAGCGAGATTCTTGA 1098 0.4508 MDTYILILIFLSVCLSPVRPVLFAFVSLKDTKSCLCRQSFLFWPLLSSDFLVFFSFASSNKVNLMARERIQIKKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSATGKLFEYSSTSMKEILNRYHLHSKNLSNQEQPSVELQLVENSNYTSLSKEVAEKSRQLRRMRGEDLQGLNIEELQQLERSLESGLGRVIEKKEEKIMTEISDLERKGVELMEENEMLKRQVEQLSDGNRHGGAESEIVNNEEGQSSESVTIVCNSPGPPQDYDSSDTSLKLGKCFPPVWSINVTCIGIDISSGLQTGDSYIAKMELSSLWNWIGYLRVHGSSSVEGEARGHGQCVVLQSLEVSSMRQKRDS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0996 365 MobiDBLite consensus disorder prediction 239 279 - -
Lele51g0996 365 PANTHER SERUM RESPONSE FACTOR HOMOLOG 67 249 - -
Lele51g0996 365 ProSiteProfiles MADS-box domain profile. 65 125 IPR002100 GO:0003677|GO:0046983
Lele51g0996 365 Coils Coil 158 178 - -
Lele51g0996 365 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 74 121 IPR002100 GO:0003677|GO:0046983
Lele51g0996 365 Gene3D - 77 158 IPR036879 GO:0003677|GO:0046983
Lele51g0996 365 Pfam K-box region 155 235 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele51g0996 365 ProSiteProfiles K-box domain profile. 151 241 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele51g0996 365 ProSitePatterns MADS-box domain signature. 67 121 IPR002100 GO:0003677|GO:0046983
Lele51g0996 365 Coils Coil 214 234 - -
Lele51g0996 365 CDD MADS_MEF2_like 66 139 IPR033896 GO:0000977|GO:0045944
Lele51g0996 365 FunFam Transcription factor, MADS-box 77 147 - -
Lele51g0996 365 SUPERFAMILY SRF-like 67 142 IPR036879 GO:0003677|GO:0046983
Lele51g0996 365 MobiDBLite consensus disorder prediction 252 279 - -
Lele51g0996 365 SMART madsneu2 65 124 IPR002100 GO:0003677|GO:0046983
Lele51g0996 365 PRINTS MADS domain signature 67 87 IPR002100 GO:0003677|GO:0046983
Lele51g0996 365 PRINTS MADS domain signature 87 102 IPR002100 GO:0003677|GO:0046983
Lele51g0996 365 PRINTS MADS domain signature 102 123 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0996 Lele-ChrLele51 6268925 6276340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0996 65 286 MADS-box Gene Family AT2G22540 65.532 8.40e-102 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Lele51g0996 K-box 5.9e-17 No_clan