Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0993 ATGGCACCACAAAAGCATACTAGAATCGTCAATTTTGATTGCTTCAGAGTTCGAAGCTCTGTTTCTGGTGATCCATTACACTTGTATTTTCAAATTCCTTGCTGTTTCCTTTTTGCCCAATTGTTCATTTGCGGTTGGATTAATGGGTATCTTTGTTTTGTGGAATTAAGAAAATGTCTACCTGATTGCAAGACCTTACCGGCTATTCATTTTCATTCCATGATGGCTCTTCCCGGTTCTCTGCAGTTGTCCCGTGGATTGGGACGTTGTTGGAACCAGAGTTACAATAAACAACCTTTGCTCCTGAAACAAGAATGCTGGAGACTTCGACTCTCTTGCAACATAAACAGGCCAGTACACGCCTTTTCTTGCAAATCCCAGTCTTTCAAGTGTCACTCTTTTCTAGCACCCGGCGGACCAAGTGAACTACCTGTTATTAAGGTGGTTGCCACAGCATTGGCAAGGTCCTGTAATGTTTTACAAGGTAATCCTGTCATAGCAAAGTTAATTCCAGCACTTGGTGTAGTCACATTTTCTATATGGGGTGTCAGCCCATTACTATTTCTAACAAGAAAACTGTTCCTTCAGAAGGATAGCAATTGGAAGAAAAGCAGCACAAATTATATAGGAACTTCTTATCTTCAGCCAATATTGTTATGGATTGGAGCTATACTTGTGTGCAGAGCTTTGGAGTCAATAGTTCTGCCTACAGAAACTAGCCAGATTGTAAAGGGAAGGCTTTTGAATTTTGTAAGATCATTGTCAACTGTACTGTCATTTGCGTATTGTTTATCAAGTGTGATTCAACAAGCACAGAGATTCTTTGTTCAGAGTGCTGATGCCAATGAGGCAAGAAATATGGGGTTCCAATTTGCCAGCAATGCTGTGTACTCTGCAGTATGGATTGCCGCCTTTTCATTGTTCATGGAATTGCTGGGTTTCTCTACCCAGAAATGGCTTACTGCAGGAGGTCTTGGGACAGTTTTGCTTACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGCTTGATGATTCACGCAACCAGACCTTTTGTGACGAATGAATGGATTCAAACAAGGATTGAAGGATATGAAGTTTCTGGTCATGTAGAGCATGTTGGCTGGTGGTCACCGACAATCATAAGAGGTGAAGATCGTGAGGCTGTTCATGTTCCAAACCACAAATTTACAATGAGTGTCGTGAGAAACCTTAGTCAGAAAACACATTGGAGGATCAAAACCTACTTATGCATCAGTCATTTGGATGTCGGCAAGATTAACAATATTGTTGCTGACATGCGGAAAGTCTTGGCTAAAAATCCTCAAGTAGAGCAGCAGCGGCTACACAGGAGAGTGTTTCTGGAGGATATAAATCCTGAAAATCAAGCTCTTATGATACTGGTATCGTGTTTTGTCAAGACCTCACGTCATGAAGAGTATTTCCGTGTTAAGGAAATTATACTATTAGATCTTCTTAGAGTCATTGGTCATCATGGGGCTCGACTTGCAACACCAGTTCGTACTCTGCAGAGGAGATATAGTGATGAGGACTTAGAGAACATACCCTATGCAGATTCTTTTGCTGGTGATGCTAGACCAGCACGTAAACGCCCATTGTTATTGATTGAGCCACCTTACAAAATCAACTCTGATGATAAAACAAGAAGCCACAGAACACAAACCAAACAATCTGCAAAAACTGATGCCAAGGCTGGATCATCATTGGTTCCAGATTCCAATGTTAGAGAAACTCCTTCAAACTCCAAGTCAGGTTCCACGGATGTGAATGGAAAATCCGAAAATGCCACGTCATCCGTGGTTGATCCTGAAGATGATTCACTGAAACCAGATTCGAATACTAAGGGAAATATTGGGTTGCCAGATGTCTCTGCTTCCAATTCAAAAGCAAATTTAACCCAGAACTTGAACAACCTTAAGCAGAAAACTGAGTCTGACTATATAATGTCATCTTCAGCTTCCAGTAATGCTGACATGGCGCGTGGGCTTCCTTTGGATAAACCATCAAAACAACAAGACGAAAGGAAACCAGGTGAACAGCCTCCTACTACATCTAGGACTGATGTTGAAGAGAATATAGTCCTTGGTGTTGCATTGGAGGGATCAAAGAGAACCCTTCCTATTGATTATTGA 2157 0.414 MAPQKHTRIVNFDCFRVRSSVSGDPLHLYFQIPCCFLFAQLFICGWINGYLCFVELRKCLPDCKTLPAIHFHSMMALPGSLQLSRGLGRCWNQSYNKQPLLLKQECWRLRLSCNINRPVHAFSCKSQSFKCHSFLAPGGPSELPVIKVVATALARSCNVLQGNPVIAKLIPALGVVTFSIWGVSPLLFLTRKLFLQKDSNWKKSSTNYIGTSYLQPILLWIGAILVCRALESIVLPTETSQIVKGRLLNFVRSLSTVLSFAYCLSSVIQQAQRFFVQSADANEARNMGFQFASNAVYSAVWIAAFSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSLMIHATRPFVTNEWIQTRIEGYEVSGHVEHVGWWSPTIIRGEDREAVHVPNHKFTMSVVRNLSQKTHWRIKTYLCISHLDVGKINNIVADMRKVLAKNPQVEQQRLHRRVFLEDINPENQALMILVSCFVKTSRHEEYFRVKEIILLDLLRVIGHHGARLATPVRTLQRRYSDEDLENIPYADSFAGDARPARKRPLLLIEPPYKINSDDKTRSHRTQTKQSAKTDAKAGSSLVPDSNVRETPSNSKSGSTDVNGKSENATSSVVDPEDDSLKPDSNTKGNIGLPDVSASNSKANLTQNLNNLKQKTESDYIMSSSASSNADMARGLPLDKPSKQQDERKPGEQPPTTSRTDVEENIVLGVALEGSKRTLPIDY 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0993 718 MobiDBLite consensus disorder prediction 540 637 - -
Lele51g0993 718 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 93 717 IPR045042 -
Lele51g0993 718 MobiDBLite consensus disorder prediction 550 566 - -
Lele51g0993 718 MobiDBLite consensus disorder prediction 655 699 - -
Lele51g0993 718 MobiDBLite consensus disorder prediction 620 637 - -
Lele51g0993 718 MobiDBLite consensus disorder prediction 675 689 - -
Lele51g0993 718 SUPERFAMILY Sm-like ribonucleoproteins 337 407 IPR010920 -
Lele51g0993 718 MobiDBLite consensus disorder prediction 567 610 - -
Lele51g0993 718 Gene3D - 250 351 - -
Lele51g0993 718 Pfam Mechanosensitive ion channel 295 503 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0993 Lele-ChrLele51 6252935 6258734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0993 111 717 Mechanosensitive Ion Channel Family AT5G10490 55.921 0.0 669