Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0984 ATGGAAATACTGAGGTCCGCCGATTCTCAGTTCGTTCAATACGACAATCTCTCTGCTAACAATTCTTCTCACTACTGCGTCGATAATTTCTATGCCAATGGTAACCTAACGCTACGTTGGGGGGCGAATCTGAAGTCGCAAGCAGATTACTATGGCCAAGGTGAGCAAAACCTAAGCGGAGAGAGCTTGCCGGGTCCACACAATCAGAACGACGGAGTGCCGAAGCTGGAAGATTTTCTGGGCTACTCCGATAGCCAAACGGAGACGCAAGATTCGTCGCTGACTCAGATATACGAGCAGGGAGGAGGCGGCGCCGGCTACTTCGGAGACCCGCAAGATCTGAAAGCAATCGCTGGGTTTCAAGCTTTTTCTGCGAACTCCGGCTCCGAGGTGGAAGACTCTGCGTCCATCGCCAAGACAGCTTATCATCAGGCTGCTTGTGGGGACTTCGCGATCGAGTCGTCCGGTAACGACGTGGCTTTCTCCGGTTGTGCAACCGGTGCTTTGTCTCTCGGCATCGCAAACAGTCGTGAGAAAGCCATTGTCGTGGTGGATTCAGATAGCTCGAAGAAAGTCGCCGATACTTTTGGTCAGCGAACTTCAATCTACAGAGGCGTTACAAGACACCGATGGACGGGAAGATATGAAGCCCATCTATGGGATAACAGTTGCCGGAGAGAGGGTCAGGCGAGGAAAGGACGTCAAGGTGGATATGACAAAGAAGACAAGGCTGCTAGAGCTTATGATTTGGCTGCTCTAAAGTATTGGGGCCCGACTGCCACCACCAACTTTCCCGTTTCGAATTACGCAAAGGAATTGGAGGAGATGAAACATGTAACTAAGCAAGAATTCATTGCTTCACTGAGAAGGAAAAGTAGCGGTTTTTCTAGAGGAGCTTCTATATACAGGGGAGTAACAAGGCATCATCAGCAAGGACGATGGCAAGCGAGAATTGGTCGTGTTGCAGGAAACAAAGATCTATACCTTGGAACATTTGCTACTGAAGAGGAAGCAGCGGAGGCGTATGATATTGCAGCCATTAAATTCAGAGGTGCTGGTGCAGTGACGAACTTTGAGATGAACAGATATGATGTGGAAGCTATTATGAAGAGTACTCTTCCTGTTGGTGGATCAGTCAAACGCGCTAAACGTTCCCCAGAATCAGAACACAATATTGCTCTTCCTACCAATATCCATCCTCCGCAATATCCAAACGCGATTAATACCAACGCTGGATCTATCAGTTTCACTCCCATTCAACCTGCACTCGCATCTTCTATCCCTTGTGCCATTCCCTATGATTCTGCCGCAGCACATTACCCCCCCAATCTCTTTCACCATTTTTATCCTACTAGCAACTCTGCAACTGTGGATTCCAATGTATCTGTGACCGCCGCTCCCATAACTGCTCTGCCGGCTGCTGCTGCTGAGTTTTTCCTGTGGCCTCATCAGCCATGTTGA 1461 0.4908 MEILRSADSQFVQYDNLSANNSSHYCVDNFYANGNLTLRWGANLKSQADYYGQGEQNLSGESLPGPHNQNDGVPKLEDFLGYSDSQTETQDSSLTQIYEQGGGGAGYFGDPQDLKAIAGFQAFSANSGSEVEDSASIAKTAYHQAACGDFAIESSGNDVAFSGCATGALSLGIANSREKAIVVVDSDSSKKVADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEDKAARAYDLAALKYWGPTATTNFPVSNYAKELEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGAGAVTNFEMNRYDVEAIMKSTLPVGGSVKRAKRSPESEHNIALPTNIHPPQYPNAINTNAGSISFTPIQPALASSIPCAIPYDSAAAHYPPNLFHHFYPTSNSATVDSNVSVTAAPITALPAAAAEFFLWPHQPC 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0984 486 ProSiteProfiles AP2/ERF domain profile. 301 359 IPR001471 GO:0003700|GO:0006355
Lele51g0984 486 Pfam AP2 domain 301 351 IPR001471 GO:0003700|GO:0006355
Lele51g0984 486 Pfam AP2 domain 202 257 IPR001471 GO:0003700|GO:0006355
Lele51g0984 486 ProSiteProfiles AP2/ERF domain profile. 202 265 IPR001471 GO:0003700|GO:0006355
Lele51g0984 486 CDD AP2 300 359 IPR001471 GO:0003700|GO:0006355
Lele51g0984 486 FunFam AP2-like ethylene-responsive transcription factor ANT 201 267 - -
Lele51g0984 486 SUPERFAMILY DNA-binding domain 201 267 IPR016177 GO:0003677
Lele51g0984 486 FunFam AP2-like ethylene-responsive transcription factor 300 361 - -
Lele51g0984 486 CDD AP2 201 267 IPR001471 GO:0003700|GO:0006355
Lele51g0984 486 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 68 392 - -
Lele51g0984 486 SMART rav1_2 301 365 IPR001471 GO:0003700|GO:0006355
Lele51g0984 486 SMART rav1_2 202 271 IPR001471 GO:0003700|GO:0006355
Lele51g0984 486 SUPERFAMILY DNA-binding domain 300 360 IPR016177 GO:0003677
Lele51g0984 486 Gene3D AP2/ERF domain 202 267 IPR036955 GO:0003700|GO:0006355
Lele51g0984 486 Gene3D AP2/ERF domain 301 361 IPR036955 GO:0003700|GO:0006355
Lele51g0984 486 PRINTS Ethylene responsive element binding protein signature 341 361 IPR001471 GO:0003700|GO:0006355
Lele51g0984 486 PRINTS Ethylene responsive element binding protein signature 203 214 IPR001471 GO:0003700|GO:0006355
Lele51g0984 486 MobiDBLite consensus disorder prediction 55 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0984 Lele-ChrLele51 6204335 6208054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0984 64 484 AP2-EREBP Transcription Factor Family AT5G10510 55.469 7.60e-155 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele51g0984 AP2 1.1e-08 CL0081