Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0974 ATGTATTGTGGAATATGCCACTCCGACCTCCACAATATGCTCAAGAACGATTGGGGCATTTCAGTCTATCCACTTGTACCTGGGCATGAGATTGCTGGTATGGTGACAGAGGTGGGAAGCAAGGTAGAAAAGTTCCAGGTTGGAGACAAGGTTGGTGTGGGATACATGGTTGACTCCTGCCGCTCATATGACAGCAATTCCGACGACCTTGAGAACCAGTGCTCTAAACATATGCTTACTTCTGGTTCCAAGTACGTCGATGGCCCTATGACATATGGAGGTTACTCTGACTTTATGGTTGCCGACGAGCACTTGGTGGTTAGAATTCAAGATGCTTTGCCTCTTGATGCTGCGGCTCCTCTGCTGTGTGCTGGGATCACAGTGTATAGCCCTTTGAGGTACTTTGGTTTCGACAAGCCAGGCCCTCGTGTGGGAGTGGTTGGTGGCCTTGGCCATATGGCTGTCAAGTTTGCCAAAGCCTTTGGGGCTAAGGTCACTGTCATCAGCACATCTCCTAACAAAAAGAAAGAAGCCACTCAACATCTTGGAGTTGACTCCTTTGTTGTCAGTCGCGAGGAAGATCAGATGCAGGCTGCAATGGGGACTTTGGATGGGATAATTGACACAGTTTCAGCACAGCGTACTCTGACGGCTTTGATTGGTCTGTTGAAGCCTAACGGAAAACTTGTGTTGGTGGGTGCACCTGTAAAGCCCCTAGATCTGCCTGTGTTCCCTTTAATTGCGGGAATGTACATAGAAGTTATTCCAGTGGATTACATGAATACCGCAATGGAGCGTCTCCATAAAGCTGATGTCAAATATCGTTTTGTGATTGACATTGCCAACACATTGAAGCCATCAACAACCTCTTAG 873 0.4765 MYCGICHSDLHNMLKNDWGISVYPLVPGHEIAGMVTEVGSKVEKFQVGDKVGVGYMVDSCRSYDSNSDDLENQCSKHMLTSGSKYVDGPMTYGGYSDFMVADEHLVVRIQDALPLDAAAPLLCAGITVYSPLRYFGFDKPGPRVGVVGGLGHMAVKFAKAFGAKVTVISTSPNKKKEATQHLGVDSFVVSREEDQMQAAMGTLDGIIDTVSAQRTLTALIGLLKPNGKLVLVGAPVKPLDLPVFPLIAGMYIEVIPVDYMNTAMERLHKADVKYRFVIDIANTLKPSTTS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0974 290 Gene3D - 2 123 - -
Lele51g0974 290 Gene3D - 252 280 - -
Lele51g0974 290 FunFam Cinnamyl alcohol dehydrogenase 124 254 - -
Lele51g0974 290 Pfam Alcohol dehydrogenase GroES-like domain 2 108 IPR013154 -
Lele51g0974 290 Pfam Zinc-binding dehydrogenase 149 252 IPR013149 -
Lele51g0974 290 SMART PKS_ER_names_mod 4 278 IPR020843 GO:0016491
Lele51g0974 290 FunFam Putative cinnamyl alcohol dehydrogenase 6 251 280 - -
Lele51g0974 290 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 28 42 IPR002328 GO:0008270|GO:0016491
Lele51g0974 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 113 249 IPR036291 -
Lele51g0974 290 CDD CAD1 2 279 - -
Lele51g0974 290 Gene3D - 124 249 - -
Lele51g0974 290 SUPERFAMILY GroES-like 2 142 IPR011032 -
Lele51g0974 290 PANTHER ALDEHYDE REDUCTASE 1 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0974 Lele-ChrLele51 6153347 6154625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0974 1 287 Monolignol Biosynthesis Gene Families AT4G37990 59.937 2.55e-117 339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0959 49 6043863 6044875 Lele51g0974 51 6153347 6154625 hybridization
Lele50g1019 50 6497763 6499415 Lele51g0974 51 6153347 6154625 hybridization