Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0957 ATGGCTCGTCATCAACACAATAATATTCCCCATCGTGATCATCATCATCATCAAGAAACTGTGATCAACGTTAAGAGGCCGGTGAACTTCACCGGAGGGCTTGAGTTTTCAGGCTTGACCTACAAAGTGACGAAGAAGAAGAAGGTTGATGGAAGCTGGGTGAAGGAGAACGTGGACTTGCTTCATAACATTACTGGGTATGCGCCAAAGGGTTGTATCACGGCAGTGATGGGTCCCAGTGGTGCAGGCAAGTCGACGTTCTTGGATGGTCTTGCTGGCAGAATTGCTAGTGGGAGTCTTAAGGGAAGGGTGTGTTTGGATGGCACAGATACTAACCCTACTTTGATCAAAAGAACTTCTGCTTATATCATGCAGGACGATAGACTCTTCCCTATGCTCACTGTCTATGAAACTTTCATGTTTGCTGCTGATTTTCGACTAGGTCCACTTTCTGTTGTTGAAAAGAAGCAGAGAGTAGAGAAGCTCATTGAGCAGCTTGGCTTATCGTCAACTCGAAACACGTACATCGGAGACGAAGGCACAAGAGGAGTATCTGGAGGAGAGAGGCGTCGGGTGTCGATCGGCGTCGACATCATCCATGGACCATCCCTTCTGTTTCTCGACGAGCCGACTTCTGGTCTGGACTCCACCAGCGCACACAGCGTCATCGAGAAGGTTCACGACATCGCCCGCGGCGGCAGCACCGTCATCCTCACCATCCACCAGCCTTCCTCCAGAATCCAAGCTCTTCTCGACCACCTCATCATCCTCGCCAGAGGCCAGCTCATGTTTCAGGGCTCTCCCAAAGGCGTCTCTCTCCATCTCGGTCGCATGGGACGGAAAGTTCCCAAGGGAGAGAATCCGATCGAGCACCTCATTGATGTGATTCAAGAATATGATCAGTGTGATGTCGGTGTCGGAGCTCTCGCTGAGTTTGCCCGCACCGGAGTTAAACCCCCTCCTTTGCCTGACCGGGAATTCTCCCTCTTCACCGTCACTCATTCAACCCCAGCTCGAAACCCCCGCTTTGAGGATCGTTCAGCCGTCGACGATTTTGATCATAGTGTGAGAAGTATGAGAAGCCCTCGTACACCCCATAGTGGATTGTTTCACAAGTTAACACCTTCCCTCTTCAAGAATGAACATAGACTGCAGAATAATCATTTAAGTAATGCTTCGCCGGGTTACTACACGTACTCGAGCGAGATCCTGCCGGCGACGCCGCCGCCTCATAGCAGCGACTACACTGTGAACGAGAATGACTACCTGACTCCTCCAGATGGCGTTCCGAAGCATTTGGGTCCGAAATTTGCGAACTCGTTCTTGGCGGAGACGTGGATTCTGATGCGGCGGAACTTCATAAACATCAGGCGAACTCCTGAGCTTTTTCTCTCCAGATTGATGGTGCTCACGGTGATGGGCATCATGATGGCTACCATGTTCAAGAGCCCTAAACAAGACGTTCAAGGGATTACCAACCGCCTCAGTTTCTTCATCTTCACCGTCTGTCTCTTCTTCTTCTCCTCCAACGACGCCGTGCCGGCGTTCATCCATGAGCGTTTCATTTTCATCAGGGAAACTTCCCACAACGCATATCGAGCCTCATCCTATACCATCGCCGGCATAATCACTCACACACCTTTTCTTGTTCTGCAAGCTTCCGTCTACGCCATCATCGTCTGGTTCGCTTTGAAGCTCGAAGGCCCTTTTCTGTACTTCGTGTTGGTTCTCTTCGTTTCCCTTCTCTCCACAAACTCGTTCGTTGTTTTTGTGAGCTCAGTGGTTCCAAACTATATCCTCGGTTATGCTGCTGTTATCGCTTTCACTGCTTTGTTCTTCTTGTTCTGTGGTTACTTCTTGAGCAGCAAGGATATTCCTATTTATTGGCGTTGGATGAACAAGATTTCGACGATGACTTATCCCTATGAAGGGCTTTTGATAAACGAGTATCGGAACTCAGATGTGTTTGGATTGAACCTGGACGGGACAGATATTACAGGTTTTGATATCTTGAACAGTCTTCATATAAGCACTGATTCGTTTAGGAAGTGGGGAAATGTGATTATAATGTTGTTCTGGGCCGTCATATATAGGATTTTCTTTTACCTGATCCTTCGTTTTGCTTCCAAAAACCAGAGGTCGTAG 2145 0.4876 MARHQHNNIPHRDHHHHQETVINVKRPVNFTGGLEFSGLTYKVTKKKKVDGSWVKENVDLLHNITGYAPKGCITAVMGPSGAGKSTFLDGLAGRIASGSLKGRVCLDGTDTNPTLIKRTSAYIMQDDRLFPMLTVYETFMFAADFRLGPLSVVEKKQRVEKLIEQLGLSSTRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARGGSTVILTIHQPSSRIQALLDHLIILARGQLMFQGSPKGVSLHLGRMGRKVPKGENPIEHLIDVIQEYDQCDVGVGALAEFARTGVKPPPLPDREFSLFTVTHSTPARNPRFEDRSAVDDFDHSVRSMRSPRTPHSGLFHKLTPSLFKNEHRLQNNHLSNASPGYYTYSSEILPATPPPHSSDYTVNENDYLTPPDGVPKHLGPKFANSFLAETWILMRRNFINIRRTPELFLSRLMVLTVMGIMMATMFKSPKQDVQGITNRLSFFIFTVCLFFFSSNDAVPAFIHERFIFIRETSHNAYRASSYTIAGIITHTPFLVLQASVYAIIVWFALKLEGPFLYFVLVLFVSLLSTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSKDIPIYWRWMNKISTMTYPYEGLLINEYRNSDVFGLNLDGTDITGFDILNSLHISTDSFRKWGNVIIMLFWAVIYRIFFYLILRFASKNQRS 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0957 714 Pfam ABC-2 type transporter 445 650 IPR013525 GO:0016020|GO:0140359
Lele51g0957 714 Pfam ABC transporter 61 212 IPR003439 GO:0005524
Lele51g0957 714 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 272 IPR027417 -
Lele51g0957 714 Pfam ABC-2 type transporter 241 297 IPR043926 GO:0140359
Lele51g0957 714 FunFam ABC transporter G family member 6 44 282 - -
Lele51g0957 714 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 284 IPR003439 GO:0005524
Lele51g0957 714 SMART AAA_5 70 268 IPR003593 -
Lele51g0957 714 ProSitePatterns ABC transporters family signature. 184 198 IPR017871 GO:0005524|GO:0016887
Lele51g0957 714 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 701 - -
Lele51g0957 714 Gene3D - 34 298 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0957 Lele-ChrLele51 6037478 6040421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0957 29 372 Calmodulin-binding Proteins AT2G36910 24.786 2.71e-12 68.6