LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele51g0946	ATGGCAGATAACTCTCTAACAAATTCAGCTTCTTCTCCGTCATGGTTTACGCCTAAAAGGTGCTTGATCTTTTTTCTCCTTTTCCCTCATTTTTCAATCCGGGATTGTGAATTAGCGGCAAAGGAAGCAATTCTCTTCTCTTTCTATACGTGGGATTATAATGCTAGCCGTCAAGTGGGATTTGTACTTCGGGTAGTGGAATTCAAACCTCATCATTCAAGTGAAATGCACCTTGCTAGGGCTAAAGTATGGTTCCCAGACTTAAGGATTGTTGGTGATGCTTCTTTGGATTATGAAATAACGGGGGATTTCAAGTTGAGCAATTTTCAAGATGGAATTCTGTCATCTGCCTTTATGGTTGGGCTTCTGGTTGCTTCTCCTATATTTGCATCTCTGGCCAAAAGCCATAATCCATTTCGGCTAATTGGAGTTGGCTTATCTGTTTGGACATTTGCAGTAGCTGGCTGTGGTAGTTCCTTTGATTTTTGGTCTATTGCAATATGCCGCATGCTAGTTGGTGTGGGTGAGGCATCCTTCATAAGTCTTGCAGCCCCATTTATAGATGATAATGCTCCTGTTGCACAGGTTGGAAGCCTTATTAATTGGCGCTTTGCATTTTGGGGTGAGGCAATTTTGATGCTTCCTTTTCCTATTCTGGGCTTTGCAATTGAACCTTTGCCATTGAAAGGCTTTATTCCGATGGAACCCAGAGAAGCACTAATATCTGTTGAAAGAGTTGCTCCAGAAACTGGAGGTGATGGCACACTAGCTGGTGATCAGGCTTTTATCAGAGAGTCCAAGTCAACTTCAAAATTGTGGAATCAGTTCACCAGAGTCGCTAATGACATGCAGACTCTTATGCATGATCAAGTTAATGCCGACTTATTATTTGGGGGTATGACAATTGTTTGTGGGATTTTGGGCACATTAGCTGGAGGCGTGATTCTTGACAGGATGACTTCAACAATCTCTAATGCTTTCAAGGCTCCTGTGAATTATATTTCCTTACGTTGTGTAAAACCAAGTTTGAGGCCACTATCTATGGCAATCTCCACTGTTTCAATCCATGTATTTGGAGATGTACCTTCCTCACCACTTGTTGGGATCCTGCAGAAGAGAGTTAATCCTATCTATTGTACAGGGATTTTTCTGAAAAGTGTTGTTCTATCCAACGAAGAAGATGCTGACGAACAACCTGCTACATCTAGAAGAGAGAAAATGAAGCCATTACTTGAAGATGATTCCCACCTGCCTTGTGCATCGTTATTGTTTCTTGCTCATGTCAATCTGTTAAATCTGGGGGATGCAGAAAATGTTGGATTACGGCATTATCTTATGGAAGGGCTATGTTCTCTTGCAAAGGCGTTGGCTCCAAAGCCAGCCTACACACCACTTCCTGGCCAGCCTCCCAAGTATTCTGGTGCTATCGATGCTGTCAAGAAGACATTAGCTGCTGAAGGTCCCAGAGGATTATACGAAGGTATGGGTGCACTACTTGCCACAGTTGCAGCATTTAATGCTGTCCTGTTCTCGGTCCGGGGACAAATGGAGGCCTTATTGAGGTCCCATCCCAGTACCCCCCTTACCGTCAAACAGCAGGTTGTTTGTGGTGCTGATGCTGGAGCTGTAGTTTTCATTCTAGCTTGCCCCACTGAACTCATCAAATGCAGGTCAATGATCATCACCCTTCTGATGTCATATTCTATAGAGAAATTGTTTTGTAGTATTGATCCATATGAAATTTGTAGATAGTTGCAAGCACAAAGTGTTCTTGCAGGTTCTGGAACAGCTTCTGTGGCTATAAAGTATGGAGGACCCATGGATGTGGCAAGGCAAGTTTTAAGATCCGAAGGGGGAATGAGAGGTCTATTCAAGGGCATGGTTCTGAAGATGGCACGCGAAAGGCTTCTTGATTGTTTCAGGAGGCTTGGCTGGAGCTTTCAGGAAGATTTTAGCTTCAGAAAGGTTAAAAGAAATCCAAAGTTTTTTGGTTCCATTGATGCTTTCAGGAAGATTTTAGCTTCAGAAGGGTTAAAAGGTCTTTACAAGGGCTTTGGTCCTGCCATAGCTCGAAGTGTTCCAGCAAACGCAGCTTGCTTCTTGGCCCATGAAATGACTAGATCAGCCCTGGGTTGA	2136	0.4335	MADNSLTNSASSPSWFTPKRCLIFFLLFPHFSIRDCELAAKEAILFSFYTWDYNASRQVGFVLRVVEFKPHHSSEMHLARAKVWFPDLRIVGDASLDYEITGDFKLSNFQDGILSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAVAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVAQVGSLINWRFAFWGEAILMLPFPILGFAIEPLPLKGFIPMEPREALISVERVAPETGGDGTLAGDQAFIRESKSTSKLWNQFTRVANDMQTLMHDQVNADLLFGGMTIVCGILGTLAGGVILDRMTSTISNAFKAPVNYISLRCVKPSLRPLSMAISTVSIHVFGDVPSSPLVGILQKRVNPIYCTGIFLKSVVLSNEEDADEQPATSRREKMKPLLEDDSHLPCASLLFLAHVNLLNLGDAENVGLRHYLMEGLCSLAKALAPKPAYTPLPGQPPKYSGAIDAVKKTLAAEGPRGLYEGMGALLATVAAFNAVLFSVRGQMEALLRSHPSTPLTVKQQVVCGADAGAVVFILACPTELIKCRSMIITLLMSYSIEKLFCSIDPYEICRXLQAQSVLAGSGTASVAIKYGGPMDVARQVLRSEGGMRGLFKGMVLKMARERLLDCFRRLGWSFQEDFSFRKVKRNPKFFGSIDAFRKILASEGLKGLYKGFGPAIARSVPANAACFLAHEMTRSALG	711

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele51g0946	711	PANTHER	MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED	662	710	-	-
	Lele51g0946	711	Pfam	Mitochondrial carrier protein	529	633	IPR018108	-
	Lele51g0946	711	Pfam	Mitochondrial carrier protein	470	521	IPR018108	-
	Lele51g0946	711	Pfam	Mitochondrial carrier protein	660	710	IPR018108	-
	Lele51g0946	711	Gene3D	Mitochondrial carrier domain	452	640	IPR023395	-
	Lele51g0946	711	Gene3D	Mitochondrial carrier domain	648	711	IPR023395	-
	Lele51g0946	711	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	584	709	IPR018108	-
	Lele51g0946	711	SUPERFAMILY	Mitochondrial carrier	465	704	IPR023395	-
	Lele51g0946	711	Pfam	Major Facilitator Superfamily	99	214	IPR011701	GO:0022857\|GO:0055085
	Lele51g0946	711	Gene3D	MFS general substrate transporter like domains	89	231	IPR036259	-
	Lele51g0946	711	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	442	519	IPR018108	-
	Lele51g0946	711	SUPERFAMILY	MFS general substrate transporter	100	320	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele51g0946	Lele-ChrLele51	5920780	5935283	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele51g0946	468	705	Antiporters	AT1G79900	26.408	4.06e-13	68.9