Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0941 ATGACAGACTATAGGTCGCCGCCGACGATGAACCTTTGGACAGATGAGAACTCCTCCTTTATGGAGGCTTTCATGAGCTCCGATCTATCTGCACTCTGGCCTCCTCCGCCTCAGCCCCAATCCTCTGCTTCCACTACTACTCCTGGACCTGACCCCACCAAGCCTCTCTCTCAGTCTCAGTCTTCCACTGCTCTCTTCAATCAAGAAACCCTTCAGCAGCGCCTTCAGTCTTTGATTGAAGGTGCTAGAGAGAGCTGGACCTACGCTATCTTTTGGCAATCGTCGTACGACTACTCCGGCGCGTCCTTGCTCGGCTGGGGCGATGGGTACTACAAAGGGGAGGAAGATAAAGGAAAAGGGAAGGCCAAAGCGCTGTCGTCCGCGGCGGAGCAGGAGTACCGGAAGAAGGTTCTACGCGAGCTGAATTCCCTCATTTCTAGATCCTCTGCCCCCAACGACGATGCCGTGGACGAAGAAGTCACCGATACAGAGTGGTTCTTCCTCGTTTCCATGACTCAATCGTTTGTCAACGGCGACGGGTTACCGGGTCAGGCCTTCTACAATTCCACTCCTGTCTGGATGACCGGTGGGGAGAATTTGGCGGCTTCGACTTGCGAAAGAGCGAGGCAGGGTCAGGTGTTCGGGCTTCAGACTTTGGTTTGTATACCGTCGGCGAATGGGGTGGTGGAGCTGGGATCCACTGAATTGATTTTCCAAAACTCGGATCTGATGAACAAGGTGAAGGTATGGTTCAATTTCAACAATCCAGAAATTGGTTCGTGGCCTCTGATGGCTCCTAATGCCGATCAAGGGGAGAACGACCCTTCATCGCTTTGGCTGAACGATCCGTCTTCTGGAATTGAAATCAGAGATTCGACCAACACCACTGTTCCGGCTTCGGTTCCGAGCTCGAATAACAGTCACAACGTCCAGACAGTTGCTAAACCAATGCAGTTTGAAACCCCAGTTTCGAGTACTTTAACTGAAGCACCAAGTGTTGTTCATGTCCCGAATACTCAATACGGTAACCAGCAACGGCAACCGTCACAGCAATCGCAGAGCCAGGGGTTCTTCTCGAAGGAGTTGAACTTTTCGGAATACGGGTTCGACGGGAACGGCCTAAAGAACGGGAATATGCATTCCTTGAAGCCGGAATCAGGTGAAATTTTGAACTTCGGGGAGAGCAAGAGGAACTCTTATGGTGGAAATGGGAATTTCTTTACAGGACAGAGTCCATTCGTTGCAGAAGACAGCAAAAAGAGGAGGTCACCTACTTCCAAGGGTAGTAACGATGAAGGGATGCTCTCGTTCACTTCCGGTGTGATTTTGCCTGCTTCTAATATGAAGTGTAGCGGCGGCGGGGGCGGCGGCGACTCCGATCACTCGGATCTTGAAGCATCGGTGGTGAAGGAAGCGGAGAGTAGCAAAGTGGTAGAACTAGAAAAGCGACCTCGCAAAAGAGGTCGAAAGCCGGCGAATGGCCGGGAGGAGCCACTGAATCACGTTGAAGCAGAGAGGCAGAGGAGAGAGAAGCTGAATCAGAGGTTCTACGCACTTCGTGCTGTGGTCCCAAACGTGTCAAAAATGGACAAAGCATCCCTCCTGGGCGACGCCATATCTTACATCAACGAGCTCAAGTCGAAGCTCCAGAATCAAGAATCAGACAACAATGATTTGCAGAAGCAGCTAGATTCAGTCAAGAAGGAACACGAGCTGGCCACAAGTAAAGATTCTCGCGCTCCTCCGCCAGATAGAGAACAAAAGAGCTCCAACAATCAAGCAAACGGCAAGCTAATAGATTTAGACATCGATGTGAAGATCATAGGTTGGGATGCAATGATTCGAATCCAATGTAGCAAAAGGAACCATCCGGCAGCGAGGTTGATGGCGGCTTTACAGGAACTGGACCTTGAAGTGAACCATGCGAGTGTGTCGGTAGTTAATGATCTGATGATCCAACAAGCAACAGTAAAAATGGGAAGTCGATTTTACACGCAGGAACAGCTCCGTCTAGCACTTGTATCCAAGGTCGGAGATGTCCGATAA 2046 0.5064 MTDYRSPPTMNLWTDENSSFMEAFMSSDLSALWPPPPQPQSSASTTTPGPDPTKPLSQSQSSTALFNQETLQQRLQSLIEGARESWTYAIFWQSSYDYSGASLLGWGDGYYKGEEDKGKGKAKALSSAAEQEYRKKVLRELNSLISRSSAPNDDAVDEEVTDTEWFFLVSMTQSFVNGDGLPGQAFYNSTPVWMTGGENLAASTCERARQGQVFGLQTLVCIPSANGVVELGSTELIFQNSDLMNKVKVWFNFNNPEIGSWPLMAPNADQGENDPSSLWLNDPSSGIEIRDSTNTTVPASVPSSNNSHNVQTVAKPMQFETPVSSTLTEAPSVVHVPNTQYGNQQRQPSQQSQSQGFFSKELNFSEYGFDGNGLKNGNMHSLKPESGEILNFGESKRNSYGGNGNFFTGQSPFVAEDSKKRRSPTSKGSNDEGMLSFTSGVILPASNMKCSGGGGGGDSDHSDLEASVVKEAESSKVVELEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQNQESDNNDLQKQLDSVKKEHELATSKDSRAPPPDREQKSSNNQANGKLIDLDIDVKIIGWDAMIRIQCSKRNHPAARLMAALQELDLEVNHASVSVVNDLMIQQATVKMGSRFYTQEQLRLALVSKVGDVR 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0941 681 MobiDBLite consensus disorder prediction 566 584 - -
Lele51g0941 681 FunFam Transcription factor bHLH13 489 563 - -
Lele51g0941 681 Pfam Helix-loop-helix DNA-binding domain 500 545 IPR011598 GO:0046983
Lele51g0941 681 CDD bHLH_AtAIB_like 493 570 - -
Lele51g0941 681 MobiDBLite consensus disorder prediction 44 62 - -
Lele51g0941 681 MobiDBLite consensus disorder prediction 448 506 - -
Lele51g0941 681 MobiDBLite consensus disorder prediction 566 595 - -
Lele51g0941 681 MobiDBLite consensus disorder prediction 401 435 - -
Lele51g0941 681 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 71 251 IPR025610 -
Lele51g0941 681 MobiDBLite consensus disorder prediction 29 62 - -
Lele51g0941 681 Coils Coil 542 576 - -
Lele51g0941 681 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 496 545 IPR011598 GO:0046983
Lele51g0941 681 SMART finulus 502 551 IPR011598 GO:0046983
Lele51g0941 681 MobiDBLite consensus disorder prediction 463 506 - -
Lele51g0941 681 PANTHER MYC 44 676 IPR045084 GO:0003700|GO:0006355
Lele51g0941 681 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 499 565 IPR036638 GO:0046983
Lele51g0941 681 Gene3D - 489 563 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0941 Lele-ChrLele51 5890290 5892335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0941 1 678 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 55.540 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele51g0941 bHLH-MYC_N 2.8e-55 CL0161