Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0930 ATGGCTGCGCTTGGAAACCCAAAAACTTGGATTCCCTATGTGAACATCAGAGATTGCTCTCAAGGTTTTTGCAGTGTTTACTGTCCAAAGTGGTGTTATATAGTTCCTCCTCCTCCTCCTCCTCCTCCTGCTCTTGATTTCCCTCAAGATGATGATTCATCTCCAAATTTCTCTCCTCTTGTTATAGCCATAATTGGGATCTTGGCCAGTGCTTTTCTTCTTGTAAGTTATTACACTTTCATATCCAAGTACTGTGGGAACGGAGCAGGATCATCTTCAGACAGAGAGAATCTACACCAGAATGATGAGATTATTGAAGATAATCACAACCCTTCTCTGCACGAACCATGGCATGTTCAAACCAATGGATTAGATGAAGCTCTGATAAAGTCAATCACAGTGTGTAAGTATAAAAGAGGAGATGGGTTGGTTGGTGTCACAGATTGCTCTGTTTGTCTCAGTGAGTTCCGAGAAGATGAAAATGTCAGATTATTGCCTAAATGCAGTCACGCTTTTCACCTTCCTTGTATCGATCAATGGCTCAAATCTCACTCTAATTGCCCTCTCTGTCGTGCTCTTATCTTCACCTTCAATTCTTCTTCCACCCCTCAAGTGGTTCCATTTCCACCTGTGATACAAGATGAAGAATCTTCCTCAGGAAATGAATCTTCTTCAAGAGAAATTCAGAATGCAAGTGAAGAAAACAGAGGGCTTGGGGATGTGGAAGAAGAAGAAGGTCGGAAGCCAGCGTTGCGTGCTTTTAGCGATCTGGGTTTTCTGCGAGGGAGGCAAAGAATGATGATTGAGATTATCAGAGATGAAGGGGATGAAGAAGACGATGAAGCCATAAGAAGGTCGGTGTCGATGGATCATCATTCGCTGCAAATTGGAGTAGGATCAAACGAGGCAGGTACTTCAAAGAGATCATCATCACAAGGAGAAAGTAGCAAGTCAAGTAGTAGCAGAAGAAGAAGGGTTCTTCTTCATTGTGTGTTGAGTCCAATCACAATGAAGAGATCATTTTCCAGTGGAAGATTCTCGTTTCGCAGAAATGGCAGAGCAAGGCAGGGGATTATCCCTGTCTAA 1086 0.4291 MAALGNPKTWIPYVNIRDCSQGFCSVYCPKWCYIVPPPPPPPPALDFPQDDDSSPNFSPLVIAIIGILASAFLLVSYYTFISKYCGNGAGSSSDRENLHQNDEIIEDNHNPSLHEPWHVQTNGLDEALIKSITVCKYKRGDGLVGVTDCSVCLSEFREDENVRLLPKCSHAFHLPCIDQWLKSHSNCPLCRALIFTFNSSSTPQVVPFPPVIQDEESSSGNESSSREIQNASEENRGLGDVEEEEGRKPALRAFSDLGFLRGRQRMMIEIIRDEGDEEDDEAIRRSVSMDHHSLQIGVGSNEAGTSKRSSSQGESSKSSSSRRRRVLLHCVLSPITMKRSFSSGRFSFRRNGRARQGIIPV 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0930 361 PANTHER RING-H2 FINGER PROTEIN ATL16 43 327 IPR044600 GO:0016567|GO:0016740
Lele51g0930 361 MobiDBLite consensus disorder prediction 214 232 - -
Lele51g0930 361 FunFam RING-H2 finger protein ATL54 124 197 - -
Lele51g0930 361 MobiDBLite consensus disorder prediction 207 247 - -
Lele51g0930 361 SUPERFAMILY RING/U-box 148 197 - -
Lele51g0930 361 ProSiteProfiles Zinc finger RING-type profile. 149 191 IPR001841 -
Lele51g0930 361 MobiDBLite consensus disorder prediction 293 317 - -
Lele51g0930 361 CDD RING-H2_PA-TM-RING 148 191 - -
Lele51g0930 361 SMART ring_2 149 190 IPR001841 -
Lele51g0930 361 MobiDBLite consensus disorder prediction 287 323 - -
Lele51g0930 361 Pfam Ring finger domain 148 191 IPR001841 -
Lele51g0930 361 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 197 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0930 Lele-ChrLele51 5803970 5805055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0930 6 361 C3H Transcription Factor Family AT5G17600 41.953 2.23e-67 214