Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0929 ATGGCTCTGCTTGAGACTCTTTCTTCTAATGAGCTTTTCAACTTCATTATCCATGACACTATCTCTGCAACCCCATTTGATTCCTCCTCAGAAAACAGAGTAGTGAATCATCATCCACTACTGGAACATCATGACCCTGCTTCTTCTTCTTCTTCTTCTTCAAGGAAACGCCATTCTGATGAGCTTGAGCTTCATCAGGTGCCTGTTCTTGTGCAAGGGAGGAAAAAGAGGAGAAGGAAGCCAAGAGTTTGTAAGAGCAAAGAAGAAGCTGAGACACAGAGAATGACACACATTGCAGTTGAAAGAAACCGTCGAAAGCAGATGAATGAGCATCTCGCCGTCCTCCGTTCACTCATGCCTGAATCCTACGTCCAAAGGGGTGACCAGGCCTCTATAGTGGGTGGTGCTATAGAATTTGTGAAGGAGCTTGAGCATATTTTGCAGTCACTTGAAGCTAAGAAGTTCCAGATTCTGCAACAAGAAGTAGCACAAACTAATAATGAAGACTCTTCTTCTTCTTCTTCTTCATCATCTTCCATTTTCAAACTCATAAGTCCACCTTTTGCACAATTCTTTGCTTATCCTCAGTACACATGGTCTCAGACTCCAACCAAATATCCTTCAAAAACTAAAGCAGCCATAGCAGATATTGAGGTTACTTTGATAGAAACACATGCAAACCTCAGAATTCTGTCAAGGAGAAGCCCCAGGCAATTGTCAAAGCTGGTCTCTGGTTTTCAAACTCTCTACCTCACAATCCTTCATCTTAATATCAGCACCATTGACCCTTTGGTGCTTTATTCTATCAGTGCCAAGGTTGAAGAAGGATGCCACCTTGGTTCAGCGGAGGATATAGCGACAGCAGTTCATCACTTGCTGAGAAGAATTGAGGAGGAAGCTGCTTCACTTTGCTGTTGA 918 0.4303 MALLETLSSNELFNFIIHDTISATPFDSSSENRVVNHHPLLEHHDPASSSSSSSRKRHSDELELHQVPVLVQGRKKRRRKPRVCKSKEEAETQRMTHIAVERNRRKQMNEHLAVLRSLMPESYVQRGDQASIVGGAIEFVKELEHILQSLEAKKFQILQQEVAQTNNEDSSSSSSSSSSIFKLISPPFAQFFAYPQYTWSQTPTKYPSKTKAAIADIEVTLIETHANLRILSRRSPRQLSKLVSGFQTLYLTILHLNISTIDPLVLYSISAKVEEGCHLGSAEDIATAVHHLLRRIEEEAASLCC 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0929 305 MobiDBLite consensus disorder prediction 41 64 - -
Lele51g0929 305 MobiDBLite consensus disorder prediction 41 91 - -
Lele51g0929 305 Gene3D - 83 174 IPR036638 GO:0046983
Lele51g0929 305 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 92 143 IPR011598 GO:0046983
Lele51g0929 305 SMART finulus 98 149 IPR011598 GO:0046983
Lele51g0929 305 Pfam Helix-loop-helix DNA-binding domain 93 144 IPR011598 GO:0046983
Lele51g0929 305 Coils Coil 140 160 - -
Lele51g0929 305 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 91 159 IPR036638 GO:0046983
Lele51g0929 305 CDD bHLH_AtFAMA_like 95 154 - -
Lele51g0929 305 PANTHER MAX DIMERIZATION, MAD 31 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0929 Lele-ChrLele51 5796317 5797724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0929 84 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 56.316 5.97e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele51g0929 HLH 1.1e-10 No_clan