Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0921 ATGGGTAGGGTTCCATGTTGTGGAGAGAGTAGTGGGGTGAAGAAAGGACCATGGACACCAGAAGAAGATGAGAAGCTAATGGAATATATCAGAAAGCGTGGCCATGGAAGTTGGAGGACACTTCCAAAGCATGCTGGTCTCAATAGGTGTGGCAAGAGTTGCAGGCTCAGGTGGACTAATTATCTGAGGCCTGATATCAAGAGAGGTAAATTCTCTGAAGAAGAAGAACGAATCATCATCAACCTTCATTCTGTTCTCGGAAACAAGTGGTCAAAGATTGCAGGCCATCTTCCGGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACTCATATAAGGAAGAAGCTGCTTCAGATGGGAATTGACCCAGAAACTCACAAACCCAGAACTGACTTCAATCAACTCATCAGTCTCTCTCACTTGCTTGGAATCGTCTCATCAAACAATATTGTGGCTCCATGGGGAAACAACAACAACAATCCTCTGGCTTCACAACTTGATCTCACTACTCAATTAACCAAAATCCAACTTCAGAAAAACCTGTTACAAATTGCTAATTCAAACCCTTGCCTCTTAGGCAATAATAATCATCATGCCCTCAACATCCCACTTCATCAACTGCAATCTCTTATTAATGGGACCACCGGAGTTCAAGAACATGCAAACCCAGATGGTTTATTATTCCCTCAAGCACACAGTGAGAATCACGATGGTACTTCAAAGTGGTCGGCTGATGTACAAGGAGGATCATCTGGTTTTAATAATGGTAGCAACATTTGGAATATTATTCCTCATCAGAGCCAGTCGGAGATGACAATACCTGCTCTGGTCTCGGCGTCTCCGGTGACCAGCTCAGCCGTAAAGCAAACGGGCGGTAGCTGCAATACAACTCAAGCGTCCACTGATCATCGTCAGTCACCTAATTCCTCTACAATGTTTGAGAGTTGGGAGAAGCTCCTGGATGATGAAATAACTGGTTCTGACTGGAACGAGATTCTTGAGTATATTATCATCAACTTTGGCGTCTCCAATCTCGTGGTAGAGATATTGAATAATTGCCTTTTCTGGGAACAAAAACCATGGAAAACACACAAGATTATCTATGCATAG 1113 0.4313 MGRVPCCGESSGVKKGPWTPEEDEKLMEYIRKRGHGSWRTLPKHAGLNRCGKSCRLRWTNYLRPDIKRGKFSEEEERIIINLHSVLGNKWSKIAGHLPGRTDNEIKNYWNTHIRKKLLQMGIDPETHKPRTDFNQLISLSHLLGIVSSNNIVAPWGNNNNNPLASQLDLTTQLTKIQLQKNLLQIANSNPCLLGNNNHHALNIPLHQLQSLINGTTGVQEHANPDGLLFPQAHSENHDGTSKWSADVQGGSSGFNNGSNIWNIIPHQSQSEMTIPALVSASPVTSSAVKQTGGSCNTTQASTDHRQSPNSSTMFESWEKLLDDEITGSDWNEILEYIIINFGVSNLVVEILNNCLFWEQKPWKTHKIIYA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0921 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Lele51g0921 370 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Lele51g0921 370 FunFam MYB-related transcription factor 14 67 - -
Lele51g0921 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele51g0921 370 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Lele51g0921 370 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lele51g0921 370 MobiDBLite consensus disorder prediction 288 310 - -
Lele51g0921 370 FunFam Transcription factor MYB39 70 131 - -
Lele51g0921 370 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Lele51g0921 370 CDD SANT 17 62 IPR001005 -
Lele51g0921 370 SMART sant 67 115 IPR001005 -
Lele51g0921 370 SMART sant 14 64 IPR001005 -
Lele51g0921 370 Gene3D - 69 135 - -
Lele51g0921 370 Gene3D - 14 67 - -
Lele51g0921 370 CDD SANT 70 113 IPR001005 -
Lele51g0921 370 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 290 - -
Lele51g0921 370 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0921 Lele-ChrLele51 5742043 5743993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0921 1 335 MYB Transcription Factor Family AT3G02940 45.588 1.23e-83 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele51g0921 Myb_DNA-binding 7.6e-16 CL0123