Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0920 ATGTCCGACCGGAGTGCATTGTCCGGCGTCGGCTCACCGGAGGAGGGAAAGAAGAAGAAGGAGAGAAAAGTCCCTCTGTTGAAGTTGTTCTCTTTCGCTGACTCCTATGACTATGTGCTCATGGCCGTTGGATCCGTCGGTGCATGTGTTCATGGCGCTTCTGTTCCCGTTTTCTTCATCTTCTTCGGCAAGTTGATCAATGTCATAGGCCTCGCTTACCTCTTTCCCCAACAAGCTTCTCACCAAGTTGCCAAGTATTCGTTGGATCTCGTGTATCTGAGTATAGTCATCTTGTTTTCGTCCTGGACAGAGGTGGCATGTTGGATGCACACTGGGGAAAGACAAACAGCGAAGATGAGAATGGCATATTTAAGATCAATGCTGAATCAAGACATAAGTTTATTCGATACAGAAGCTTCAACTGGGGAGGTTATTTCTACCATTTCCAGCGAGATCCTCGTTGTTCAAGATGCACTCTCTGAGAAGGTATCATCATTTCCTGTGTTAATGGAGCAGTGTGAACTAAATGCCATGACAGTAACACAGTATTGTTGTTTTGCATCGTTTTTATGGCAGGCAGGAAATTTCTTGCACTACATAAGCCGGTTCGTAGCGGGATTTACCATTGGGTTCGTCAGAATATGGCAGATCAGTCTAGTCACACTTTCGATTGTTCCCTTGATTGCCGTCGCCGGAGGTCTTTATGCTTACGTCACCGTCGGCCTTATTGCCGAAGTCCGAAAATCCTACGTTAGGGCTGGTGAAATCGCCGAAGAGGTGATAGGGAATGTCAGAACGGTTCAGGCATTTGCTGGAGAAGAGAGAGCAGTGAGATCATACAAAGCGGCTCTCGTGAATACTTATAAGAATGGCCGGAAAGCAGGTTTAACAAAGGGTCTTGGACTCGGCTCCATGCATTGTGTCCTCTTTCTGTCATGGGCACTGCTTGTTTGGTTCACTAGTGTTGTCGTTCACAAGAAAATCGCCAATGGAGGCGACTCTTTTACTACCATGCTCAATGTTGTCATCTCTGGCCTGTCGCTAGGGCAGGCAGCACCAGATATATCTGCATTTATCCGAGCTAAGGCAGCAGCCTATCCCATTTTTGAGATGATCGAAAGGGAAACACTTTCAGATGCTGAGTCTTTCATTAACAATCTTCCTGAAAGATTGGAAACTCAGGTTGGAGAGAGAGGTATACAACTTTCAGGTGGACAAAAACAAAGGATTGCTATATCTCGAGCCATTCTGAAGAACCCATCAATCCTTTTATTGGATGAAGCTACCAGTGCTCTGGATGCGGAATCTGAGAAGAGTGTACAGGAAGCTCTTGATCATGTCATGGTTGGTAGAACAACTGTCATAGTGGCCCACAGACTTTCTACAATTAGGAATGCAGATATGATTGCTGTTGTTCAGGGAGGGAGAATTGTAGAAATTGGTAACCATGAGGAGCTCATTTCTAACCCAAATAGCATATATGCATCTCTCATTCAACTGCAGGAGAAAGCTTCTTTGCAAAGCCACCAGCCAGAGGGTCCTACTAGTGTGGCACAAAGAGAATTGTCCTGTACAAGCCTTGGAAGCAGTTTTCGGTCAGATAAAGAATCTTTAGGCCGTGTTTGTGCTGATGAAGTGGAAAGTGTAGCCAAGTCAAGTCATGTTTCTGTGAAAAGACTGTATTCAATGATTGCACCAGACTGGTTTTATGGGGTTTCTGGCACCTTTTGTGCATTTATTGCTGGAGCCCAAATGCCACTTTTTGCTCTTGGAATCTCTCATGCTCTTGTATCATACTATATGGACTGGGACACAACGCGTCATGAGGTTAAAAAAATCACTTTTCTATTCTGTGGGGCAGCAATAGTGACTATTACTGTCCATGCCATTGAGCATCTTTCTTTTGGAATCATGGGCGAGCGACTTACTCTTCGTGTGCGGGAAATGATATTTTCTGCTATTTTGAAAAATGAAATCGGCTGGTTTGATGATACAAACAACACAAGTTCAATGCTATCATCACGTTTAGAGATGGATGCAACTTTATTCCGAACTATAGTTGTTGATCGGTCTACAATTCTCTTACAGAATGTTGGTCTGGTTGTTGCTTCATTTATTATTGCCTTCATGCTGAACTGGAGGATAACACTAGTTGTCTTGGCCACATACCCTTTGATCATTAGTGGTCACATCAGCGAGAAACTTTTCATGAAAGGCTATGGTGGCAACTTGAGCACAGCATATCTGAAAGCCAACATGCTGGTTGGGGAAGCTGTCAGTAACATGCGTACTGTTGCTGCATTTTGTTCTGAAGAAAAGGTCCTAAAACTTTATGCTAATGAGCTTGTCGAGCCTTCTAAGCTTTCATTTAAACGGGGACAAATTTCTGGCATATTCTATGGCATTTCGCAGTTCTTCATTTTCTCTTCTTATGGCCTTGCCTTGTGGTATGGTTCTGTTTTGATGGAAAAGGAGCTGGCTAGCTTCAAATCCGTCATGAAGTCATTTATGGTTCTAATTGTAACTGCATTGGGTATGGGAGAGACGTTGGCACTGGCCCCAGATCTTTTGAAAGGGAACCAAATGGTTGCTTCAGTTTTTGAAGTGATGGATAGAAAGTCGGGAATGGTGGCCGATGCCGGAGAAGAGCTTGAGATGGTGGAGGGAACAATCGAGCTAAAACAAATCCATTTTAGTTACCCCTCAAGGCCTGATGTAGTGATTTTTAAAGATTTTAATCTGAAAGTGCCTTCAGGCAGGAGTATTGCCTTAGTGGGACAAAGTGGTTCTGGTAAAAGCTCTGTCATCTCCCTTATACTCAGATTTTATGATCCATCGTCTGGGAGAGTGATGATTGATGGAAAAGACATTAGGAGACTCCATTTGAAGTCATTGAGGAAGCATATTGGTCTTGTGCAACAAGAACCCGCGCTTTTTGCAACATCAATCTATGAAAACATTCTATATGGAAGGGAAGGAGCTTCTGACTCAGAGGTAATTGAAGCAGCTAAGCTTGCCAATGCTCACAGTTTCATCAGTTCTCTTCCGGATGGCTACACTACCGAAGTGGGCGAACGAGGCGTCCAACTCTCCGGTGGCCAGAGACAAAGGGTAGCCATAGCCAGAGCTGTTCTAAAGAACCCAGAAATCTTGCTACTAGATGAAGCCACTAGTGCACTTGATGTGGAATCTGAGCGTGTGGTGCAGCAAGCTCTAGACAGATTGATGCACAACAGGACAACAGTTATGGTGGCACACAGGCTATCCACAATAAGGAATGCGGATCAAATCTCAGTTTTGCAGGATGGGAAGATAATAGAGCAAGGGACTCATTCAAGTCTCATAGAGAACAAAGATGGAGCATATTTTAAATTAGTCAATCTTCAACAACACCAGCGGCTATAA 3405 0.4405 MSDRSALSGVGSPEEGKKKKERKVPLLKLFSFADSYDYVLMAVGSVGACVHGASVPVFFIFFGKLINVIGLAYLFPQQASHQVAKYSLDLVYLSIVILFSSWTEVACWMHTGERQTAKMRMAYLRSMLNQDISLFDTEASTGEVISTISSEILVVQDALSEKVSSFPVLMEQCELNAMTVTQYCCFASFLWQAGNFLHYISRFVAGFTIGFVRIWQISLVTLSIVPLIAVAGGLYAYVTVGLIAEVRKSYVRAGEIAEEVIGNVRTVQAFAGEERAVRSYKAALVNTYKNGRKAGLTKGLGLGSMHCVLFLSWALLVWFTSVVVHKKIANGGDSFTTMLNVVISGLSLGQAAPDISAFIRAKAAAYPIFEMIERETLSDAESFINNLPERLETQVGERGIQLSGGQKQRIAISRAILKNPSILLLDEATSALDAESEKSVQEALDHVMVGRTTVIVAHRLSTIRNADMIAVVQGGRIVEIGNHEELISNPNSIYASLIQLQEKASLQSHQPEGPTSVAQRELSCTSLGSSFRSDKESLGRVCADEVESVAKSSHVSVKRLYSMIAPDWFYGVSGTFCAFIAGAQMPLFALGISHALVSYYMDWDTTRHEVKKITFLFCGAAIVTITVHAIEHLSFGIMGERLTLRVREMIFSAILKNEIGWFDDTNNTSSMLSSRLEMDATLFRTIVVDRSTILLQNVGLVVASFIIAFMLNWRITLVVLATYPLIISGHISEKLFMKGYGGNLSTAYLKANMLVGEAVSNMRTVAAFCSEEKVLKLYANELVEPSKLSFKRGQISGIFYGISQFFIFSSYGLALWYGSVLMEKELASFKSVMKSFMVLIVTALGMGETLALAPDLLKGNQMVASVFEVMDRKSGMVADAGEELEMVEGTIELKQIHFSYPSRPDVVIFKDFNLKVPSGRSIALVGQSGSGKSSVISLILRFYDPSSGRVMIDGKDIRRLHLKSLRKHIGLVQQEPALFATSIYENILYGREGASDSEVIEAAKLANAHSFISSLPDGYTTEVGERGVQLSGGQRQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMHNRTTVMVAHRLSTIRNADQISVLQDGKIIEQGTHSSLIENKDGAYFKLVNLQQHQRL 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0920 1134 FunFam ABC transporter B family member 4 881 1133 - -
Lele51g0920 1134 SUPERFAMILY ABC transporter transmembrane region 558 872 IPR036640 GO:0005524|GO:0016020
Lele51g0920 1134 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 251 499 IPR003439 GO:0005524
Lele51g0920 1134 Gene3D - 881 1133 IPR027417 -
Lele51g0920 1134 CDD ABC_6TM_Pgp_ABCB1_D2_like 561 874 - -
Lele51g0920 1134 PANTHER ABC TRANSPORTER B FAMILY 546 1129 - -
Lele51g0920 1134 SMART AAA_5 331 482 IPR003593 -
Lele51g0920 1134 SMART AAA_5 918 1104 IPR003593 -
Lele51g0920 1134 Pfam ABC transporter transmembrane region 46 166 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele51g0920 1134 Pfam ABC transporter transmembrane region 193 343 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele51g0920 1134 Pfam ABC transporter transmembrane region 574 844 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele51g0920 1134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 501 IPR027417 -
Lele51g0920 1134 CDD ABC_MTABC3_MDL1_MDL2 891 1129 - -
Lele51g0920 1134 Pfam ABC transporter 910 1058 IPR003439 GO:0005524
Lele51g0920 1134 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 574 858 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele51g0920 1134 CDD ABC_6TM_Pgp_ABCB1_D1_like 41 368 - -
Lele51g0920 1134 ProSitePatterns ABC transporters family signature. 1030 1044 IPR017871 GO:0005524|GO:0016887
Lele51g0920 1134 Gene3D ABC transporter type 1, transmembrane domain 14 374 IPR036640 GO:0005524|GO:0016020
Lele51g0920 1134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 884 1129 IPR027417 -
Lele51g0920 1134 ProSitePatterns ABC transporters family signature. 402 416 IPR017871 GO:0005524|GO:0016887
Lele51g0920 1134 SUPERFAMILY ABC transporter transmembrane region 191 375 IPR036640 GO:0005524|GO:0016020
Lele51g0920 1134 Gene3D ABC transporter type 1, transmembrane domain 515 860 IPR036640 GO:0005524|GO:0016020
Lele51g0920 1134 Gene3D - 378 514 IPR027417 -
Lele51g0920 1134 Pfam ABC transporter 380 430 IPR003439 GO:0005524
Lele51g0920 1134 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 891 1127 IPR003439 GO:0005524
Lele51g0920 1134 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 42 360 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele51g0920 1134 SUPERFAMILY ABC transporter transmembrane region 20 165 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0920 Lele-ChrLele51 5725629 5733186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0920 36 414 Calmodulin-binding Proteins AT2G36910 24.093 1.73e-19 93.2